Ferrari F - Search Results

1

A-MADMAN: annotation-based microarray data meta-analysis tool.

Bisognin A, Coppe A, Ferrari F, Risso D, Romualdi C, Bicciato S, Bortoluzzi S. Bisognin A, et al. Among authors: ferrari f. BMC Bioinformatics. 2009 Jun 29;10:201. doi: 10.1186/1471-2105-10-201. BMC Bioinformatics. 2009. PMID: 19563634 Free PMC article.

2

Novel definition files for human GeneChips based on GeneAnnot.

Ferrari F, Bortoluzzi S, Coppe A, Sirota A, Safran M, Shmoish M, Ferrari S, Lancet D, Danieli GA, Bicciato S. Ferrari F, et al. Among authors: ferrari s. BMC Bioinformatics. 2007 Nov 15;8:446. doi: 10.1186/1471-2105-8-446. BMC Bioinformatics. 2007. PMID: 18005434 Free PMC article.

3

Genomic expression during human myelopoiesis.

Ferrari F, Bortoluzzi S, Coppe A, Basso D, Bicciato S, Zini R, Gemelli C, Danieli GA, Ferrari S. Ferrari F, et al. Among authors: ferrari s. BMC Genomics. 2007 Aug 3;8:264. doi: 10.1186/1471-2164-8-264. BMC Genomics. 2007. PMID: 17683550 Free PMC article.

4

Motif discovery in promoters of genes co-localized and co-expressed during myeloid cells differentiation.

Coppe A, Ferrari F, Bisognin A, Danieli GA, Ferrari S, Bicciato S, Bortoluzzi S. Coppe A, et al. Among authors: ferrari f, ferrari s. Nucleic Acids Res. 2009 Feb;37(2):533-49. doi: 10.1093/nar/gkn948. Epub 2008 Dec 5. Nucleic Acids Res. 2009. PMID: 19059999 Free PMC article.

5

PREDA: an R-package to identify regional variations in genomic data.

Ferrari F, Solari A, Battaglia C, Bicciato S. Ferrari F, et al. Bioinformatics. 2011 Sep 1;27(17):2446-7. doi: 10.1093/bioinformatics/btr404. Epub 2011 Jul 7. Bioinformatics. 2011. PMID: 21742634

6

Critical analysis of transcriptional and post-transcriptional regulatory networks in multiple myeloma.

Biasiolo M, Forcato M, Possamai L, Ferrari F, Agnelli L, Lionetti M, Todoerti K, Neri A, Marchiori M, Bortoluzzi S, Bicciato S. Biasiolo M, et al. Among authors: ferrari f. Pac Symp Biocomput. 2010:397-408. doi: 10.1142/9789814295291_0042. Pac Symp Biocomput. 2010. PMID: 19908392 Free article.

7

WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes.

Puccio S, Grillo G, Licciulli F, Severgnini M, Liuni S, Bicciato S, De Bellis G, Ferrari F, Peano C. Puccio S, et al. Among authors: ferrari f. Nucleic Acids Res. 2017 Jul 3;45(W1):W109-W115. doi: 10.1093/nar/gkx329. Nucleic Acids Res. 2017. PMID: 28460063 Free PMC article.

8

Microarray data mining using Bioconductor packages.

Nie H, Neerincx PB, van der Poel J, Ferrari F, Bicciato S, Leunissen JA, Groenen MA. Nie H, et al. Among authors: ferrari f. BMC Proc. 2009 Jul 16;3 Suppl 4(Suppl 4):S9. doi: 10.1186/1753-6561-3-S4-S9. BMC Proc. 2009. PMID: 19615122 Free PMC article.

9

A computational procedure to identify significant overlap of differentially expressed and genomic imbalanced regions in cancer datasets.

Bicciato S, Spinelli R, Zampieri M, Mangano E, Ferrari F, Beltrame L, Cifola I, Peano C, Solari A, Battaglia C. Bicciato S, et al. Among authors: ferrari f. Nucleic Acids Res. 2009 Aug;37(15):5057-70. doi: 10.1093/nar/gkp520. Epub 2009 Jun 19. Nucleic Acids Res. 2009. PMID: 19542187 Free PMC article.

10

The reconstruction of transcriptional networks reveals critical genes with implications for clinical outcome of multiple myeloma.

Agnelli L, Forcato M, Ferrari F, Tuana G, Todoerti K, Walker BA, Morgan GJ, Lombardi L, Bicciato S, Neri A. Agnelli L, et al. Among authors: ferrari f. Clin Cancer Res. 2011 Dec 1;17(23):7402-12. doi: 10.1158/1078-0432.CCR-11-0596. Epub 2011 Sep 2. Clin Cancer Res. 2011. PMID: 21890453

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