Lonardi S - Search Results

1

Nucleosome landscape and control of transcription in the human malaria parasite.

Ponts N, Harris EY, Prudhomme J, Wick I, Eckhardt-Ludka C, Hicks GR, Hardiman G, Lonardi S, Le Roch KG. Ponts N, et al. Among authors: lonardi s. Genome Res. 2010 Feb;20(2):228-38. doi: 10.1101/gr.101063.109. Epub 2010 Jan 6. Genome Res. 2010. PMID: 20054063 Free PMC article.

2

BRAT: bisulfite-treated reads analysis tool.

Harris EY, Ponts N, Levchuk A, Roch KL, Lonardi S. Harris EY, et al. Among authors: lonardi s. Bioinformatics. 2010 Feb 15;26(4):572-3. doi: 10.1093/bioinformatics/btp706. Epub 2009 Dec 22. Bioinformatics. 2010. PMID: 20031974 Free PMC article.

3

Nucleosome occupancy at transcription start sites in the human malaria parasite: a hard-wired evolution of virulence?

Ponts N, Harris EY, Lonardi S, Le Roch KG. Ponts N, et al. Among authors: lonardi s. Infect Genet Evol. 2011 Jun;11(4):716-24. doi: 10.1016/j.meegid.2010.08.002. Epub 2010 Aug 11. Infect Genet Evol. 2011. PMID: 20708104 Free PMC article.

4

Chromatin-driven de novo discovery of DNA binding motifs in the human malaria parasite.

Harris EY, Ponts N, Le Roch KG, Lonardi S. Harris EY, et al. Among authors: lonardi s. BMC Genomics. 2011 Dec 13;12:601. doi: 10.1186/1471-2164-12-601. BMC Genomics. 2011. PMID: 22165844 Free PMC article.

5

BRAT-BW: efficient and accurate mapping of bisulfite-treated reads.

Harris EY, Ponts N, Le Roch KG, Lonardi S. Harris EY, et al. Among authors: lonardi s. Bioinformatics. 2012 Jul 1;28(13):1795-6. doi: 10.1093/bioinformatics/bts264. Epub 2012 May 3. Bioinformatics. 2012. PMID: 22563065 Free PMC article.

6

NORMAL: accurate nucleosome positioning using a modified Gaussian mixture model.

Polishko A, Ponts N, Le Roch KG, Lonardi S. Polishko A, et al. Among authors: lonardi s. Bioinformatics. 2012 Jun 15;28(12):i242-9. doi: 10.1093/bioinformatics/bts206. Bioinformatics. 2012. PMID: 22689767 Free PMC article.

7

Genome-wide mapping of DNA methylation in the human malaria parasite Plasmodium falciparum.

Ponts N, Fu L, Harris EY, Zhang J, Chung DW, Cervantes MC, Prudhomme J, Atanasova-Penichon V, Zehraoui E, Bunnik EM, Rodrigues EM, Lonardi S, Hicks GR, Wang Y, Le Roch KG. Ponts N, et al. Among authors: lonardi s. Cell Host Microbe. 2013 Dec 11;14(6):696-706. doi: 10.1016/j.chom.2013.11.007. Cell Host Microbe. 2013. PMID: 24331467 Free PMC article.

8

Deciphering histone code of transcriptional regulation in malaria parasites by large-scale data mining.

Chen H, Lonardi S, Zheng J. Chen H, et al. Among authors: lonardi s. Comput Biol Chem. 2014 Jun;50:3-10. doi: 10.1016/j.compbiolchem.2014.01.002. Epub 2014 Jan 23. Comput Biol Chem. 2014. PMID: 24581698

9

DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum.

Bunnik EM, Polishko A, Prudhomme J, Ponts N, Gill SS, Lonardi S, Le Roch KG. Bunnik EM, et al. Among authors: lonardi s. BMC Genomics. 2014 May 8;15(1):347. doi: 10.1186/1471-2164-15-347. BMC Genomics. 2014. PMID: 24885191 Free PMC article.

10

Novel Gene Discovery in the Human Malaria Parasite using Nucleosome Positioning Data.

Pokhriyal N, Ponts N, Harris EY, Le Roch KG, Lonardi S. Pokhriyal N, et al. Among authors: lonardi s. Comput Syst Bioinformatics Conf. 2010 Aug;9:124-135. Comput Syst Bioinformatics Conf. 2010. PMID: 25076982 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

625 results

Search Page

Filters