Törönen P - Search Results

1

Heuristic Bayesian segmentation for discovery of coexpressed genes within genomic regions.

Pehkonen P, Wong G, Törönen P. Pehkonen P, et al. Among authors: toronen p. IEEE/ACM Trans Comput Biol Bioinform. 2010 Jan-Mar;7(1):37-49. doi: 10.1109/TCBB.2008.56. IEEE/ACM Trans Comput Biol Bioinform. 2010. PMID: 20150667

2

Theme discovery from gene lists for identification and viewing of multiple functional groups.

Pehkonen P, Wong G, Törönen P. Pehkonen P, et al. Among authors: toronen p. BMC Bioinformatics. 2005 Jun 29;6:162. doi: 10.1186/1471-2105-6-162. BMC Bioinformatics. 2005. PMID: 15987504 Free PMC article.

3

Generation of Gene Ontology benchmark datasets with various types of positive signal.

Törönen P, Pehkonen P, Holm L. Törönen P, et al. BMC Bioinformatics. 2009 Oct 7;10:319. doi: 10.1186/1471-2105-10-319. BMC Bioinformatics. 2009. PMID: 19811632 Free PMC article.

4

Analysis of gene expression data using self-organizing maps.

Törönen P, Kolehmainen M, Wong G, Castrén E. Törönen P, et al. FEBS Lett. 1999 May 21;451(2):142-6. doi: 10.1016/s0014-5793(99)00524-4. FEBS Lett. 1999. PMID: 10371154 Free article.

5

Antipsychotic drug treatment induces differential gene expression in the rat cortex.

Kontkanen O, Törönen P, Lakso M, Wong G, Castrén E. Kontkanen O, et al. Among authors: toronen p. J Neurochem. 2002 Dec;83(5):1043-53. doi: 10.1046/j.1471-4159.2002.01213.x. J Neurochem. 2002. PMID: 12437575 Free article.

6

POXO: a web-enabled tool series to discover transcription factor binding sites.

Kankainen M, Pehkonen P, Rosenstöm P, Törönen P, Wong G, Holm L. Kankainen M, et al. Among authors: toronen p. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W534-40. doi: 10.1093/nar/gkl296. Nucleic Acids Res. 2006. PMID: 16845065 Free PMC article.

7

Expression profiling to understand actions of NMDA/glutamate receptor antagonists in rat brain.

Törönen P, Storvik M, Lindén AM, Kontkane O, Marvanová M, Lakso M, Castrén E, Wong G. Törönen P, et al. Neurochem Res. 2002 Oct;27(10):1209-20. doi: 10.1023/a:1020985611667. Neurochem Res. 2002. PMID: 12462419

8

Synexpression analysis of ESTs in the rat brain reveals distinct patterns and potential drug targets.

Marvanová M, Törönen P, Storvik M, Lakso M, Castrén E, Wong G. Marvanová M, et al. Among authors: toronen p. Brain Res Mol Brain Res. 2002 Aug 15;104(2):176-83. doi: 10.1016/s0169-328x(02)00356-x. Brain Res Mol Brain Res. 2002. PMID: 12225872

9

Analysis and visualization of gene expression data using self-organizing maps.

Nikkilä J, Törönen P, Kaski S, Venna J, Castrén E, Wong G. Nikkilä J, et al. Among authors: toronen p. Neural Netw. 2002 Oct-Nov;15(8-9):953-66. doi: 10.1016/s0893-6080(02)00070-9. Neural Netw. 2002. PMID: 12416686

10

Bayesian search of functionally divergent protein subgroups and their function specific residues.

Marttinen P, Corander J, Törönen P, Holm L. Marttinen P, et al. Among authors: toronen p. Bioinformatics. 2006 Oct 15;22(20):2466-74. doi: 10.1093/bioinformatics/btl411. Epub 2006 Jul 26. Bioinformatics. 2006. PMID: 16870932

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