Shimamura S - Search Results

1

Bacterial lifestyle in a deep-sea hydrothermal vent chimney revealed by the genome sequence of the thermophilic bacterium Deferribacter desulfuricans SSM1.

Takaki Y, Shimamura S, Nakagawa S, Fukuhara Y, Horikawa H, Ankai A, Harada T, Hosoyama A, Oguchi A, Fukui S, Fujita N, Takami H, Takai K. Takaki Y, et al. Among authors: shimamura s. DNA Res. 2010 Jun;17(3):123-37. doi: 10.1093/dnares/dsq005. Epub 2010 Feb 26. DNA Res. 2010. PMID: 20189949 Free PMC article.

2

Genomic characterization of thermophilic Geobacillus species isolated from the deepest sea mud of the Mariana Trench.

Takami H, Nishi S, Lu J, Shimamura S, Takaki Y. Takami H, et al. Among authors: shimamura s. Extremophiles. 2004 Oct;8(5):351-6. doi: 10.1007/s00792-004-0394-3. Epub 2004 May 27. Extremophiles. 2004. PMID: 15168170

3

Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus.

Takami H, Takaki Y, Chee GJ, Nishi S, Shimamura S, Suzuki H, Matsui S, Uchiyama I. Takami H, et al. Among authors: shimamura s. Nucleic Acids Res. 2004 Dec 1;32(21):6292-303. doi: 10.1093/nar/gkh970. Print 2004. Nucleic Acids Res. 2004. PMID: 15576355 Free PMC article.

4

Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments.

Nunoura T, Hirayama H, Takami H, Oida H, Nishi S, Shimamura S, Suzuki Y, Inagaki F, Takai K, Nealson KH, Horikoshi K. Nunoura T, et al. Among authors: shimamura s. Environ Microbiol. 2005 Dec;7(12):1967-84. doi: 10.1111/j.1462-2920.2005.00881.x. Environ Microbiol. 2005. PMID: 16309394

5

Reduced genome of the thioautotrophic intracellular symbiont in a deep-sea clam, Calyptogena okutanii.

Kuwahara H, Yoshida T, Takaki Y, Shimamura S, Nishi S, Harada M, Matsuyama K, Takishita K, Kawato M, Uematsu K, Fujiwara Y, Sato T, Kato C, Kitagawa M, Kato I, Maruyama T. Kuwahara H, et al. Among authors: shimamura s. Curr Biol. 2007 May 15;17(10):881-6. doi: 10.1016/j.cub.2007.04.039. Curr Biol. 2007. PMID: 17493812 Free article.

6

Deep-sea vent epsilon-proteobacterial genomes provide insights into emergence of pathogens.

Nakagawa S, Takaki Y, Shimamura S, Reysenbach AL, Takai K, Horikoshi K. Nakagawa S, et al. Among authors: shimamura s. Proc Natl Acad Sci U S A. 2007 Jul 17;104(29):12146-50. doi: 10.1073/pnas.0700687104. Epub 2007 Jul 5. Proc Natl Acad Sci U S A. 2007. PMID: 17615243 Free PMC article.

7

Reductive genome evolution in chemoautotrophic intracellular symbionts of deep-sea Calyptogena clams.

Kuwahara H, Takaki Y, Yoshida T, Shimamura S, Takishita K, Reimer JD, Kato C, Maruyama T. Kuwahara H, et al. Among authors: shimamura s. Extremophiles. 2008 May;12(3):365-74. doi: 10.1007/s00792-008-0141-2. Epub 2008 Feb 28. Extremophiles. 2008. PMID: 18305898

8

Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics- and methane-rich sediments off Shimokita Peninsula.

Kobayashi T, Koide O, Mori K, Shimamura S, Matsuura T, Miura T, Takaki Y, Morono Y, Nunoura T, Imachi H, Inagaki F, Takai K, Horikoshi K. Kobayashi T, et al. Among authors: shimamura s. Extremophiles. 2008 Jul;12(4):519-27. doi: 10.1007/s00792-008-0157-7. Epub 2008 Mar 27. Extremophiles. 2008. PMID: 18368287

9

Expression of genes for sulfur oxidation in the intracellular chemoautotrophic symbiont of the deep-sea bivalve Calyptogena okutanii.

Harada M, Yoshida T, Kuwahara H, Shimamura S, Takaki Y, Kato C, Miwa T, Miyake H, Maruyama T. Harada M, et al. Among authors: shimamura s. Extremophiles. 2009 Nov;13(6):895-903. doi: 10.1007/s00792-009-0277-8. Extremophiles. 2009. PMID: 19730970

10

Molecular characterization of inorganic sulfur-compound metabolism in the deep-sea epsilonproteobacterium Sulfurovum sp. NBC37-1.

Yamamoto M, Nakagawa S, Shimamura S, Takai K, Horikoshi K. Yamamoto M, et al. Among authors: shimamura s. Environ Microbiol. 2010 May;12(5):1144-53. doi: 10.1111/j.1462-2920.2010.02155.x. Epub 2010 Feb 3. Environ Microbiol. 2010. PMID: 20132283

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