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Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity.
Morelli G, Song Y, Mazzoni CJ, Eppinger M, Roumagnac P, Wagner DM, Feldkamp M, Kusecek B, Vogler AJ, Li Y, Cui Y, Thomson NR, Jombart T, Leblois R, Lichtner P, Rahalison L, Petersen JM, Balloux F, Keim P, Wirth T, Ravel J, Yang R, Carniel E, Achtman M. Morelli G, et al. Among authors: song y. Nat Genet. 2010 Dec;42(12):1140-3. doi: 10.1038/ng.705. Epub 2010 Oct 31. Nat Genet. 2010. PMID: 21037571 Free PMC article.
Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis.
Cui Y, Yu C, Yan Y, Li D, Li Y, Jombart T, Weinert LA, Wang Z, Guo Z, Xu L, Zhang Y, Zheng H, Qin N, Xiao X, Wu M, Wang X, Zhou D, Qi Z, Du Z, Wu H, Yang X, Cao H, Wang H, Wang J, Yao S, Rakin A, Li Y, Falush D, Balloux F, Achtman M, Song Y, Wang J, Yang R. Cui Y, et al. Among authors: song y. Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):577-82. doi: 10.1073/pnas.1205750110. Epub 2012 Dec 27. Proc Natl Acad Sci U S A. 2013. PMID: 23271803 Free PMC article.
Plasmids of novel incompatibility group IncpRBL16 from Pseudomonas species.
Jiang X, Yin Z, Yuan M, Cheng Q, Hu L, Xu Y, Yang W, Yang H, Zhao Y, Zhao X, Gao B, Dai E, Song Y, Zhou D. Jiang X, et al. Among authors: song y. J Antimicrob Chemother. 2020 Aug 1;75(8):2093-2100. doi: 10.1093/jac/dkaa143. J Antimicrob Chemother. 2020. PMID: 32395746
Novel plasmid and its variant harboring both a bla(NDM-1) gene and type IV secretion system in clinical isolates of Acinetobacter lwoffii.
Hu H, Hu Y, Pan Y, Liang H, Wang H, Wang X, Hao Q, Yang X, Yang X, Xiao X, Luan C, Yang Y, Cui Y, Yang R, Gao GF, Song Y, Zhu B. Hu H, et al. Among authors: song y. Antimicrob Agents Chemother. 2012 Apr;56(4):1698-702. doi: 10.1128/AAC.06199-11. Epub 2012 Jan 30. Antimicrob Agents Chemother. 2012. PMID: 22290961 Free PMC article.
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