Deng K - Search Results

1

Discovering herbal functional groups of traditional Chinese medicine.

He P, Deng K, Liu Z, Liu D, Liu JS, Geng Z. He P, et al. Among authors: deng k. Stat Med. 2012 Mar 30;31(7):636-42. doi: 10.1002/sim.4146. Epub 2011 Mar 17. Stat Med. 2012. PMID: 21413055

2

Understanding spatial organizations of chromosomes via statistical analysis of Hi-C data.

Hu M, Deng K, Qin Z, Liu JS. Hu M, et al. Among authors: deng k. Quant Biol. 2013 Jun;1(2):156-174. doi: 10.1007/s40484-013-0016-0. Quant Biol. 2013. PMID: 26124977 Free PMC article.

3

High-dimensional genomic data bias correction and data integration using MANCIE.

Zang C, Wang T, Deng K, Li B, Hu S, Qin Q, Xiao T, Zhang S, Meyer CA, He HH, Brown M, Liu JS, Xie Y, Liu XS. Zang C, et al. Among authors: deng k. Nat Commun. 2016 Apr 13;7:11305. doi: 10.1038/ncomms11305. Nat Commun. 2016. PMID: 27072482 Free PMC article.

4

On the unsupervised analysis of domain-specific Chinese texts.

Deng K, Bol PK, Li KJ, Liu JS. Deng K, et al. Proc Natl Acad Sci U S A. 2016 May 31;113(22):6154-9. doi: 10.1073/pnas.1516510113. Epub 2016 May 16. Proc Natl Acad Sci U S A. 2016. PMID: 27185919 Free PMC article.

5

Inferring Spatial Organization of Individual Topologically Associated Domains via Piecewise Helical Model.

Zhang R, Hu M, Zhu Y, Qin Z, Deng K, Liu JS. Zhang R, et al. Among authors: deng k. IEEE/ACM Trans Comput Biol Bioinform. 2020 Mar-Apr;17(2):647-656. doi: 10.1109/TCBB.2018.2865349. Epub 2018 Aug 15. IEEE/ACM Trans Comput Biol Bioinform. 2020. PMID: 30113897 Free PMC article.

6

MiRACLe: an individual-specific approach to improve microRNA-target prediction based on a random contact model.

Wang P, Li Q, Sun N, Gao Y, Liu JS, Deng K, He J. Wang P, et al. Among authors: deng k. Brief Bioinform. 2021 May 20;22(3):bbaa117. doi: 10.1093/bib/bbaa117. Brief Bioinform. 2021. PMID: 34020537

7

HiCNorm: removing biases in Hi-C data via Poisson regression.

Hu M, Deng K, Selvaraj S, Qin Z, Ren B, Liu JS. Hu M, et al. Among authors: deng k. Bioinformatics. 2012 Dec 1;28(23):3131-3. doi: 10.1093/bioinformatics/bts570. Epub 2012 Sep 27. Bioinformatics. 2012. PMID: 23023982 Free PMC article.

8

Bayesian inference of spatial organizations of chromosomes.

Hu M, Deng K, Qin Z, Dixon J, Selvaraj S, Fang J, Ren B, Liu JS. Hu M, et al. Among authors: deng k. PLoS Comput Biol. 2013;9(1):e1002893. doi: 10.1371/journal.pcbi.1002893. Epub 2013 Jan 31. PLoS Comput Biol. 2013. PMID: 23382666 Free PMC article.

9

DIMM-SC: a Dirichlet mixture model for clustering droplet-based single cell transcriptomic data.

Sun Z, Wang T, Deng K, Wang XF, Lafyatis R, Ding Y, Hu M, Chen W. Sun Z, et al. Among authors: deng k. Bioinformatics. 2018 Jan 1;34(1):139-146. doi: 10.1093/bioinformatics/btx490. Bioinformatics. 2018. PMID: 29036318 Free PMC article.

10

Detection of blood stains using computer vision-based algorithms and their association with postoperative outcomes in thoracoscopic lobectomies.

Xu H, Han T, Wang H, Liu S, Hou G, Sun L, Jiang G, Yang F, Wang J, Deng K, Zhou J. Xu H, et al. Among authors: deng k. Eur J Cardiothorac Surg. 2022 Oct 4;62(5):ezac154. doi: 10.1093/ejcts/ezac154. Eur J Cardiothorac Surg. 2022. PMID: 35352106 Free PMC article.

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