Kowalczyk A - Search Results

1

Meta-analysis of gene expression microarrays with missing replicates.

Shi F, Abraham G, Leckie C, Haviv I, Kowalczyk A. Shi F, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2011 Mar 24;12:84. doi: 10.1186/1471-2105-12-84. BMC Bioinformatics. 2011. PMID: 21435268 Free PMC article.

2

Exploiting sequence similarity to validate the sensitivity of SNP arrays in detecting fine-scaled copy number variations.

Wong G, Leckie C, Gorringe KL, Haviv I, Campbell IG, Kowalczyk A. Wong G, et al. Among authors: kowalczyk a. Bioinformatics. 2010 Apr 15;26(8):1007-14. doi: 10.1093/bioinformatics/btq088. Epub 2010 Feb 25. Bioinformatics. 2010. PMID: 20189937

3

Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context.

Abraham G, Kowalczyk A, Loi S, Haviv I, Zobel J. Abraham G, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2010 May 25;11:277. doi: 10.1186/1471-2105-11-277. BMC Bioinformatics. 2010. PMID: 20500821 Free PMC article.

4

A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer.

Shi F, Leckie C, MacIntyre G, Haviv I, Boussioutas A, Kowalczyk A. Shi F, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2010 Sep 23;11:477. doi: 10.1186/1471-2105-11-477. BMC Bioinformatics. 2010. PMID: 20860844 Free PMC article.

5

SparSNP: fast and memory-efficient analysis of all SNPs for phenotype prediction.

Abraham G, Kowalczyk A, Zobel J, Inouye M. Abraham G, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2012 May 10;13:88. doi: 10.1186/1471-2105-13-88. BMC Bioinformatics. 2012. PMID: 22574887 Free PMC article.

6

is-rSNP: a novel technique for in silico regulatory SNP detection.

Macintyre G, Bailey J, Haviv I, Kowalczyk A. Macintyre G, et al. Among authors: kowalczyk a. Bioinformatics. 2010 Sep 15;26(18):i524-30. doi: 10.1093/bioinformatics/btq378. Bioinformatics. 2010. PMID: 20823317 Free PMC article.

7

FSR: feature set reduction for scalable and accurate multi-class cancer subtype classification based on copy number.

Wong G, Leckie C, Kowalczyk A. Wong G, et al. Among authors: kowalczyk a. Bioinformatics. 2012 Jan 15;28(2):151-9. doi: 10.1093/bioinformatics/btr644. Epub 2011 Nov 21. Bioinformatics. 2012. PMID: 22110244

8

A signature predicting poor prognosis in gastric and ovarian cancer represents a coordinated macrophage and stromal response.

Busuttil RA, George J, Tothill RW, Ioculano K, Kowalczyk A, Mitchell C, Lade S, Tan P, Haviv I, Boussioutas A. Busuttil RA, et al. Among authors: kowalczyk a. Clin Cancer Res. 2014 May 15;20(10):2761-72. doi: 10.1158/1078-0432.CCR-13-3049. Epub 2014 Mar 21. Clin Cancer Res. 2014. PMID: 24658156

9

An expression-based site of origin diagnostic method designed for clinical application to cancer of unknown origin.

Tothill RW, Kowalczyk A, Rischin D, Bousioutas A, Haviv I, van Laar RK, Waring PM, Zalcberg J, Ward R, Biankin AV, Sutherland RL, Henshall SM, Fong K, Pollack JR, Bowtell DD, Holloway AJ. Tothill RW, et al. Among authors: kowalczyk a. Cancer Res. 2005 May 15;65(10):4031-40. doi: 10.1158/0008-5472.CAN-04-3617. Cancer Res. 2005. PMID: 15899792

10

GWIS--model-free, fast and exhaustive search for epistatic interactions in case-control GWAS.

Goudey B, Rawlinson D, Wang Q, Shi F, Ferra H, Campbell RM, Stern L, Inouye MT, Ong CS, Kowalczyk A. Goudey B, et al. Among authors: kowalczyk a. BMC Genomics. 2013;14 Suppl 3(Suppl 3):S10. doi: 10.1186/1471-2164-14-S3-S10. Epub 2013 May 28. BMC Genomics. 2013. PMID: 23819779 Free PMC article.

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