Hane JK - Search Results

1

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi.

Hane JK, Rouxel T, Howlett BJ, Kema GH, Goodwin SB, Oliver RP. Hane JK, et al. Genome Biol. 2011;12(5):R45. doi: 10.1186/gb-2011-12-5-r45. Epub 2011 May 24. Genome Biol. 2011. PMID: 21605470 Free PMC article.

2

The first gene-based map of Lupinus angustifolius L.-location of domestication genes and conserved synteny with Medicago truncatula.

Nelson MN, Phan HT, Ellwood SR, Moolhuijzen PM, Hane J, Williams A, O'Lone CE, Fosu-Nyarko J, Scobie M, Cakir M, Jones MG, Bellgard M, Ksiazkiewicz M, Wolko B, Barker SJ, Oliver RP, Cowling WA. Nelson MN, et al. Theor Appl Genet. 2006 Jul;113(2):225-38. doi: 10.1007/s00122-006-0288-0. Epub 2006 May 11. Theor Appl Genet. 2006. PMID: 16791689

3

Extensive macrosynteny between Medicago truncatula and Lens culinaris ssp. culinaris.

Phan HT, Ellwood SR, Hane JK, Ford R, Materne M, Oliver RP. Phan HT, et al. Among authors: hane jk. Theor Appl Genet. 2007 Feb;114(3):549-58. doi: 10.1007/s00122-006-0455-3. Epub 2006 Nov 22. Theor Appl Genet. 2007. PMID: 17119911

4

Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum.

Hane JK, Lowe RG, Solomon PS, Tan KC, Schoch CL, Spatafora JW, Crous PW, Kodira C, Birren BW, Galagan JE, Torriani SF, McDonald BA, Oliver RP. Hane JK, et al. Plant Cell. 2007 Nov;19(11):3347-68. doi: 10.1105/tpc.107.052829. Epub 2007 Nov 16. Plant Cell. 2007. PMID: 18024570 Free PMC article.

5

Construction of a comparative genetic map in faba bean (Vicia faba L.); conservation of genome structure with Lens culinaris.

Ellwood SR, Phan HT, Jordan M, Hane J, Torres AM, Avila CM, Cruz-Izquierdo S, Oliver RP. Ellwood SR, et al. BMC Genomics. 2008 Aug 9;9:380. doi: 10.1186/1471-2164-9-380. BMC Genomics. 2008. PMID: 18691425 Free PMC article.

6

RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences.

Hane JK, Oliver RP. Hane JK, et al. BMC Bioinformatics. 2008 Nov 12;9:478. doi: 10.1186/1471-2105-9-478. BMC Bioinformatics. 2008. PMID: 19014496 Free PMC article.

7

Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum.

Bringans S, Hane JK, Casey T, Tan KC, Lipscombe R, Solomon PS, Oliver RP. Bringans S, et al. Among authors: hane jk. BMC Bioinformatics. 2009 Sep 22;10:301. doi: 10.1186/1471-2105-10-301. BMC Bioinformatics. 2009. PMID: 19772613 Free PMC article.

8

A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres.

Ellwood SR, Liu Z, Syme RA, Lai Z, Hane JK, Keiper F, Moffat CS, Oliver RP, Friesen TL. Ellwood SR, et al. Among authors: hane jk. Genome Biol. 2010;11(11):R109. doi: 10.1186/gb-2010-11-11-r109. Epub 2010 Nov 10. Genome Biol. 2010. PMID: 21067574 Free PMC article.

9

Evolution of linked avirulence effectors in Leptosphaeria maculans is affected by genomic environment and exposure to resistance genes in host plants.

Van de Wouw AP, Cozijnsen AJ, Hane JK, Brunner PC, McDonald BA, Oliver RP, Howlett BJ. Van de Wouw AP, et al. Among authors: hane jk. PLoS Pathog. 2010 Nov 4;6(11):e1001180. doi: 10.1371/journal.ppat.1001180. PLoS Pathog. 2010. PMID: 21079787 Free PMC article.

10

In silico reversal of repeat-induced point mutation (RIP) identifies the origins of repeat families and uncovers obscured duplicated genes.

Hane JK, Oliver RP. Hane JK, et al. BMC Genomics. 2010 Nov 24;11:655. doi: 10.1186/1471-2164-11-655. BMC Genomics. 2010. PMID: 21106049 Free PMC article.

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