Keren L - Search Results

1

Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters.

Zeevi D, Sharon E, Lotan-Pompan M, Lubling Y, Shipony Z, Raveh-Sadka T, Keren L, Levo M, Weinberger A, Segal E. Zeevi D, et al. Among authors: keren l. Genome Res. 2011 Dec;21(12):2114-28. doi: 10.1101/gr.119669.110. Epub 2011 Oct 18. Genome Res. 2011. PMID: 22009988 Free PMC article.

2

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.

Sharon E, Kalma Y, Sharp A, Raveh-Sadka T, Levo M, Zeevi D, Keren L, Yakhini Z, Weinberger A, Segal E. Sharon E, et al. Among authors: keren l. Nat Biotechnol. 2012 May 20;30(6):521-30. doi: 10.1038/nbt.2205. Nat Biotechnol. 2012. PMID: 22609971 Free PMC article.

3

Manipulating nucleosome disfavoring sequences allows fine-tune regulation of gene expression in yeast.

Raveh-Sadka T, Levo M, Shabi U, Shany B, Keren L, Lotan-Pompan M, Zeevi D, Sharon E, Weinberger A, Segal E. Raveh-Sadka T, et al. Among authors: keren l. Nat Genet. 2012 May 27;44(7):743-50. doi: 10.1038/ng.2305. Nat Genet. 2012. PMID: 22634752

4

Measurements of the impact of 3' end sequences on gene expression reveal wide range and sequence dependent effects.

Shalem O, Carey L, Zeevi D, Sharon E, Keren L, Weinberger A, Dahan O, Pilpel Y, Segal E. Shalem O, et al. Among authors: keren l. PLoS Comput Biol. 2013;9(3):e1002934. doi: 10.1371/journal.pcbi.1002934. Epub 2013 Mar 7. PLoS Comput Biol. 2013. PMID: 23505350 Free PMC article.

5

Sequence features of yeast and human core promoters that are predictive of maximal promoter activity.

Lubliner S, Keren L, Segal E. Lubliner S, et al. Among authors: keren l. Nucleic Acids Res. 2013 Jun;41(11):5569-81. doi: 10.1093/nar/gkt256. Epub 2013 Apr 17. Nucleic Acids Res. 2013. PMID: 23599004 Free PMC article.

6

Promoters maintain their relative activity levels under different growth conditions.

Keren L, Zackay O, Lotan-Pompan M, Barenholz U, Dekel E, Sasson V, Aidelberg G, Bren A, Zeevi D, Weinberger A, Alon U, Milo R, Segal E. Keren L, et al. Mol Syst Biol. 2013 Oct 29;9:701. doi: 10.1038/msb.2013.59. Mol Syst Biol. 2013. PMID: 24169404 Free PMC article.

7

Fixated on fixation: using ChIP to interrogate the dynamics of chromatin interactions.

Keren L, Segal E. Keren L, et al. Genome Biol. 2013 Nov 21;14(11):138. doi: 10.1186/gb4139. Genome Biol. 2013. PMID: 24257511 Free PMC article.

8

Probing the effect of promoters on noise in gene expression using thousands of designed sequences.

Sharon E, van Dijk D, Kalma Y, Keren L, Manor O, Yakhini Z, Segal E. Sharon E, et al. Among authors: keren l. Genome Res. 2014 Oct;24(10):1698-706. doi: 10.1101/gr.168773.113. Epub 2014 Jul 16. Genome Res. 2014. PMID: 25030889 Free PMC article.

9

Noise in gene expression is coupled to growth rate.

Keren L, van Dijk D, Weingarten-Gabbay S, Davidi D, Jona G, Weinberger A, Milo R, Segal E. Keren L, et al. Genome Res. 2015 Dec;25(12):1893-902. doi: 10.1101/gr.191635.115. Epub 2015 Sep 9. Genome Res. 2015. PMID: 26355006 Free PMC article.

10

A Minimalistic Resource Allocation Model to Explain Ubiquitous Increase in Protein Expression with Growth Rate.

Barenholz U, Keren L, Segal E, Milo R. Barenholz U, et al. Among authors: keren l. PLoS One. 2016 Apr 13;11(4):e0153344. doi: 10.1371/journal.pone.0153344. eCollection 2016. PLoS One. 2016. PMID: 27073913 Free PMC article.

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