Sharon E - Search Results

1

Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters.

Zeevi D, Sharon E, Lotan-Pompan M, Lubling Y, Shipony Z, Raveh-Sadka T, Keren L, Levo M, Weinberger A, Segal E. Zeevi D, et al. Among authors: sharon e. Genome Res. 2011 Dec;21(12):2114-28. doi: 10.1101/gr.119669.110. Epub 2011 Oct 18. Genome Res. 2011. PMID: 22009988 Free PMC article.

2

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.

Sharon E, Kalma Y, Sharp A, Raveh-Sadka T, Levo M, Zeevi D, Keren L, Yakhini Z, Weinberger A, Segal E. Sharon E, et al. Nat Biotechnol. 2012 May 20;30(6):521-30. doi: 10.1038/nbt.2205. Nat Biotechnol. 2012. PMID: 22609971 Free PMC article.

3

Manipulating nucleosome disfavoring sequences allows fine-tune regulation of gene expression in yeast.

Raveh-Sadka T, Levo M, Shabi U, Shany B, Keren L, Lotan-Pompan M, Zeevi D, Sharon E, Weinberger A, Segal E. Raveh-Sadka T, et al. Among authors: sharon e. Nat Genet. 2012 May 27;44(7):743-50. doi: 10.1038/ng.2305. Nat Genet. 2012. PMID: 22634752

4

Measurements of the impact of 3' end sequences on gene expression reveal wide range and sequence dependent effects.

Shalem O, Carey L, Zeevi D, Sharon E, Keren L, Weinberger A, Dahan O, Pilpel Y, Segal E. Shalem O, et al. Among authors: sharon e. PLoS Comput Biol. 2013;9(3):e1002934. doi: 10.1371/journal.pcbi.1002934. Epub 2013 Mar 7. PLoS Comput Biol. 2013. PMID: 23505350 Free PMC article.

5

Probing the effect of promoters on noise in gene expression using thousands of designed sequences.

Sharon E, van Dijk D, Kalma Y, Keren L, Manor O, Yakhini Z, Segal E. Sharon E, et al. Genome Res. 2014 Oct;24(10):1698-706. doi: 10.1101/gr.168773.113. Epub 2014 Jul 16. Genome Res. 2014. PMID: 25030889 Free PMC article.

6

Unraveling determinants of transcription factor binding outside the core binding site.

Levo M, Zalckvar E, Sharon E, Dantas Machado AC, Kalma Y, Lotam-Pompan M, Weinberger A, Yakhini Z, Rohs R, Segal E. Levo M, et al. Among authors: sharon e. Genome Res. 2015 Jul;25(7):1018-29. doi: 10.1101/gr.185033.114. Epub 2015 Mar 11. Genome Res. 2015. PMID: 25762553 Free PMC article.

7

Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators.

van Dijk D, Sharon E, Lotan-Pompan M, Weinberger A, Segal E, Carey LB. van Dijk D, et al. Among authors: sharon e. Genome Res. 2017 Jan;27(1):87-94. doi: 10.1101/gr.212316.116. Epub 2016 Dec 13. Genome Res. 2017. PMID: 27965290 Free PMC article.

8

Systematic interrogation of human promoters.

Weingarten-Gabbay S, Nir R, Lubliner S, Sharon E, Kalma Y, Weinberger A, Segal E. Weingarten-Gabbay S, et al. Among authors: sharon e. Genome Res. 2019 Feb;29(2):171-183. doi: 10.1101/gr.236075.118. Epub 2019 Jan 8. Genome Res. 2019. PMID: 30622120 Free PMC article.

9

Deciphering the rules by which 5'-UTR sequences affect protein expression in yeast.

Dvir S, Velten L, Sharon E, Zeevi D, Carey LB, Weinberger A, Segal E. Dvir S, et al. Among authors: sharon e. Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):E2792-801. doi: 10.1073/pnas.1222534110. Epub 2013 Jul 5. Proc Natl Acad Sci U S A. 2013. PMID: 23832786 Free PMC article.

10

Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach.

Meyer P, Siwo G, Zeevi D, Sharon E, Norel R; DREAM6 Promoter Prediction Consortium; Segal E, Stolovitzky G. Meyer P, et al. Among authors: sharon e. Genome Res. 2013 Nov;23(11):1928-37. doi: 10.1101/gr.157420.113. Epub 2013 Aug 15. Genome Res. 2013. PMID: 23950146 Free PMC article.

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