Thomas JE - Search Results

1

Development and validation of a comparative genomic fingerprinting method for high-resolution genotyping of Campylobacter jejuni.

Taboada EN, Ross SL, Mutschall SK, Mackinnon JM, Roberts MJ, Buchanan CJ, Kruczkiewicz P, Jokinen CC, Thomas JE, Nash JH, Gannon VP, Marshall B, Pollari F, Clark CG. Taboada EN, et al. Among authors: thomas je. J Clin Microbiol. 2012 Mar;50(3):788-97. doi: 10.1128/JCM.00669-11. Epub 2011 Dec 14. J Clin Microbiol. 2012. PMID: 22170908 Free PMC article.

2

Rapid determination of Escherichia coli O157:H7 lineage types and molecular subtypes by using comparative genomic fingerprinting.

Laing C, Pegg C, Yawney D, Ziebell K, Steele M, Johnson R, Thomas JE, Taboada EN, Zhang Y, Gannon VP. Laing C, et al. Among authors: thomas je. Appl Environ Microbiol. 2008 Nov;74(21):6606-15. doi: 10.1128/AEM.00985-08. Epub 2008 Sep 12. Appl Environ Microbiol. 2008. PMID: 18791027 Free PMC article.

3

The EpiQuant Framework for Computing Epidemiological Concordance of Microbial Subtyping Data.

Hetman BM, Mutschall SK, Thomas JE, Gannon VPJ, Clark CG, Pollari F, Taboada EN. Hetman BM, et al. Among authors: thomas je. J Clin Microbiol. 2017 May;55(5):1334-1349. doi: 10.1128/JCM.01945-16. Epub 2017 Feb 15. J Clin Microbiol. 2017. PMID: 28202797 Free PMC article.

4

A Genome-Wide Association Study to Identify Diagnostic Markers for Human Pathogenic Campylobacter jejuni Strains.

Buchanan CJ, Webb AL, Mutschall SK, Kruczkiewicz P, Barker DOR, Hetman BM, Gannon VPJ, Abbott DW, Thomas JE, Inglis GD, Taboada EN. Buchanan CJ, et al. Among authors: thomas je. Front Microbiol. 2017 Jun 30;8:1224. doi: 10.3389/fmicb.2017.01224. eCollection 2017. Front Microbiol. 2017. PMID: 28713351 Free PMC article.

5

In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence.

Laing CR, Buchanan C, Taboada EN, Zhang Y, Karmali MA, Thomas JE, Gannon VP. Laing CR, et al. Among authors: thomas je. BMC Genomics. 2009 Jun 29;10:287. doi: 10.1186/1471-2164-10-287. BMC Genomics. 2009. PMID: 19563677 Free PMC article.

6

The occurrence and sources of Campylobacter spp., Salmonella enterica and Escherichia coli O157:H7 in the Salmon River, British Columbia, Canada.

Jokinen CC, Schreier H, Mauro W, Taboada E, Isaac-Renton JL, Topp E, Edge T, Thomas JE, Gannon VP. Jokinen CC, et al. Among authors: thomas je. J Water Health. 2010 Jun;8(2):374-86. doi: 10.2166/wh.2009.076. Epub 2009 Nov 9. J Water Health. 2010. PMID: 20154400

7

Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions.

Laing C, Buchanan C, Taboada EN, Zhang Y, Kropinski A, Villegas A, Thomas JE, Gannon VP. Laing C, et al. Among authors: thomas je. BMC Bioinformatics. 2010 Sep 15;11:461. doi: 10.1186/1471-2105-11-461. BMC Bioinformatics. 2010. PMID: 20843356 Free PMC article.

8

Everything at once: comparative analysis of the genomes of bacterial pathogens.

Laing CR, Zhang Y, Thomas JE, Gannon VP. Laing CR, et al. Among authors: thomas je. Vet Microbiol. 2011 Nov 21;153(1-2):13-26. doi: 10.1016/j.vetmic.2011.06.014. Epub 2011 Jun 26. Vet Microbiol. 2011. PMID: 21764529

9

Identification of Salmonella enterica species- and subgroup-specific genomic regions using Panseq 2.0.

Laing C, Villegas A, Taboada EN, Kropinski A, Thomas JE, Gannon VP. Laing C, et al. Among authors: thomas je. Infect Genet Evol. 2011 Dec;11(8):2151-61. doi: 10.1016/j.meegid.2011.09.021. Epub 2011 Oct 1. Infect Genet Evol. 2011. PMID: 22001825

10

Spatial and temporal drivers of zoonotic pathogen contamination of an agricultural watershed.

Jokinen CC, Edge TA, Koning W, Laing CR, Lapen DR, Miller J, Mutschall S, Scott A, Taboada EN, Thomas JE, Topp E, Wilkes G, Gannon VP. Jokinen CC, et al. Among authors: thomas je. J Environ Qual. 2012 Jan-Feb;41(1):242-52. doi: 10.2134/jeq2011.0203. J Environ Qual. 2012. PMID: 22218192

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