Marshall D - Search Results

1

Using Tablet for visual exploration of second-generation sequencing data.

Milne I, Stephen G, Bayer M, Cock PJ, Pritchard L, Cardle L, Shaw PD, Marshall D. Milne I, et al. Among authors: marshall d. Brief Bioinform. 2013 Mar;14(2):193-202. doi: 10.1093/bib/bbs012. Epub 2012 Mar 24. Brief Bioinform. 2013. PMID: 22445902

2

Tablet--next generation sequence assembly visualization.

Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall D. Milne I, et al. Among authors: marshall d. Bioinformatics. 2010 Feb 1;26(3):401-2. doi: 10.1093/bioinformatics/btp666. Epub 2009 Dec 4. Bioinformatics. 2010. PMID: 19965881 Free PMC article.

3

Flapjack--graphical genotype visualization.

Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WT, Flavell AJ, Marshall D. Milne I, et al. Among authors: marshall d. Bioinformatics. 2010 Dec 15;26(24):3133-4. doi: 10.1093/bioinformatics/btq580. Epub 2010 Oct 18. Bioinformatics. 2010. PMID: 20956241 Free PMC article.

4

Comparative visualization of genetic and physical maps with Strudel.

Bayer M, Milne I, Stephen G, Shaw P, Cardle L, Wright F, Marshall D. Bayer M, et al. Among authors: marshall d. Bioinformatics. 2011 May 1;27(9):1307-8. doi: 10.1093/bioinformatics/btr111. Epub 2011 Mar 3. Bioinformatics. 2011. PMID: 21372085 Free PMC article.

5

Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings.

Milne I, Bayer M, Stephen G, Cardle L, Marshall D. Milne I, et al. Among authors: marshall d. Methods Mol Biol. 2016;1374:253-68. doi: 10.1007/978-1-4939-3167-5_14. Methods Mol Biol. 2016. PMID: 26519411

6

An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome.

Ribeiro A, Golicz A, Hackett CA, Milne I, Stephen G, Marshall D, Flavell AJ, Bayer M. Ribeiro A, et al. Among authors: marshall d. BMC Bioinformatics. 2015 Nov 11;16:382. doi: 10.1186/s12859-015-0801-z. BMC Bioinformatics. 2015. PMID: 26558718 Free PMC article.

7

The low-recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression.

Baker K, Bayer M, Cook N, Dreißig S, Dhillon T, Russell J, Hedley PE, Morris J, Ramsay L, Colas I, Waugh R, Steffenson B, Milne I, Stephen G, Marshall D, Flavell AJ. Baker K, et al. Among authors: marshall d. Plant J. 2014 Sep;79(6):981-92. doi: 10.1111/tpj.12600. Epub 2014 Aug 5. Plant J. 2014. PMID: 24947331 Free PMC article.

8

Characterisation and functional analysis of two barley caleosins expressed during barley caryopsis development.

Liu H, Hedley P, Cardle L, Wright KM, Hein I, Marshall D, Waugh R. Liu H, et al. Among authors: marshall d. Planta. 2005 Jun;221(4):513-22. doi: 10.1007/s00425-004-1465-5. Epub 2005 Feb 9. Planta. 2005. PMID: 15702354

9

Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley.

Comadran J, Kilian B, Russell J, Ramsay L, Stein N, Ganal M, Shaw P, Bayer M, Thomas W, Marshall D, Hedley P, Tondelli A, Pecchioni N, Francia E, Korzun V, Walther A, Waugh R. Comadran J, et al. Among authors: marshall d. Nat Genet. 2012 Dec;44(12):1388-92. doi: 10.1038/ng.2447. Epub 2012 Nov 18. Nat Genet. 2012. PMID: 23160098

10

Changes in gene expression during meristem activation processes in Solanum tuberosum with a focus on the regulation of an auxin response factor gene.

Faivre-Rampant O, Cardle L, Marshall D, Viola R, Taylor MA. Faivre-Rampant O, et al. Among authors: marshall d. J Exp Bot. 2004 Mar;55(397):613-22. doi: 10.1093/jxb/erh075. Epub 2004 Feb 13. J Exp Bot. 2004. PMID: 14966214

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