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SNP genotyping identifies new signatures of selection in a deep sample of West African Plasmodium falciparum malaria parasites.
Amambua-Ngwa A, Park DJ, Volkman SK, Barnes KG, Bei AK, Lukens AK, Sene P, Van Tyne D, Ndiaye D, Wirth DF, Conway DJ, Neafsey DE, Schaffner SF. Amambua-Ngwa A, et al. Among authors: neafsey de. Mol Biol Evol. 2012 Nov;29(11):3249-53. doi: 10.1093/molbev/mss151. Epub 2012 Jun 11. Mol Biol Evol. 2012. PMID: 22688945 Free PMC article.
A genome-wide map of diversity in Plasmodium falciparum.
Volkman SK, Sabeti PC, DeCaprio D, Neafsey DE, Schaffner SF, Milner DA Jr, Daily JP, Sarr O, Ndiaye D, Ndir O, Mboup S, Duraisingh MT, Lukens A, Derr A, Stange-Thomann N, Waggoner S, Onofrio R, Ziaugra L, Mauceli E, Gnerre S, Jaffe DB, Zainoun J, Wiegand RC, Birren BW, Hartl DL, Galagan JE, Lander ES, Wirth DF. Volkman SK, et al. Among authors: neafsey de. Nat Genet. 2007 Jan;39(1):113-9. doi: 10.1038/ng1930. Epub 2006 Dec 10. Nat Genet. 2007. PMID: 17159979
Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparum population divergence.
Neafsey DE, Schaffner SF, Volkman SK, Park D, Montgomery P, Milner DA Jr, Lukens A, Rosen D, Daniels R, Houde N, Cortese JF, Tyndall E, Gates C, Stange-Thomann N, Sarr O, Ndiaye D, Ndir O, Mboup S, Ferreira MU, Moraes Sdo L, Dash AP, Chitnis CE, Wiegand RC, Hartl DL, Birren BW, Lander ES, Sabeti PC, Wirth DF. Neafsey DE, et al. Genome Biol. 2008;9(12):R171. doi: 10.1186/gb-2008-9-12-r171. Epub 2008 Dec 15. Genome Biol. 2008. PMID: 19077304 Free PMC article.
SNP genotyping defines complex gene-flow boundaries among African malaria vector mosquitoes.
Neafsey DE, Lawniczak MKN, Park DJ, Redmond SN, Coulibaly MB, Traoré SF, Sagnon N, Costantini C, Johnson C, Wiegand RC, Collins FH, Lander ES, Wirth DF, Kafatos FC, Besansky NJ, Christophides GK, Muskavitch MAT. Neafsey DE, et al. Science. 2010 Oct 22;330(6003):514-517. doi: 10.1126/science.1193036. Science. 2010. PMID: 20966254 Free PMC article.
123 results