Klau GW - Search Results

1

Integrated pathway modules using time-course metabolic profiles and EST data from Milnesium tardigradum.

Beisser D, Grohme MA, Kopka J, Frohme M, Schill RO, Hengherr S, Dandekar T, Klau GW, Dittrich M, Müller T. Beisser D, et al. Among authors: klau gw. BMC Syst Biol. 2012 Jun 19;6:72. doi: 10.1186/1752-0509-6-72. BMC Syst Biol. 2012. PMID: 22713133 Free PMC article.

2

OFraMP: a fragment-based tool to facilitate the parametrization of large molecules.

Stroet M, Caron B, Engler MS, van der Woning J, Kauffmann A, van Dijk M, El-Kebir M, Visscher KM, Holownia J, Macfarlane C, Bennion BJ, Gelpi-Dominguez S, Lightstone FC, van der Storm T, Geerke DP, Mark AE, Klau GW. Stroet M, et al. Among authors: klau gw. J Comput Aided Mol Des. 2023 Aug;37(8):357-371. doi: 10.1007/s10822-023-00511-7. Epub 2023 Jun 13. J Comput Aided Mol Des. 2023. PMID: 37310542 Free PMC article.

3

Identifying functional modules in protein-protein interaction networks: an integrated exact approach.

Dittrich MT, Klau GW, Rosenwald A, Dandekar T, Müller T. Dittrich MT, et al. Among authors: klau gw. Bioinformatics. 2008 Jul 1;24(13):i223-31. doi: 10.1093/bioinformatics/btn161. Bioinformatics. 2008. PMID: 18586718 Free PMC article.

4

BioNet: an R-Package for the functional analysis of biological networks.

Beisser D, Klau GW, Dandekar T, Müller T, Dittrich MT. Beisser D, et al. Among authors: klau gw. Bioinformatics. 2010 Apr 15;26(8):1129-30. doi: 10.1093/bioinformatics/btq089. Epub 2010 Feb 25. Bioinformatics. 2010. PMID: 20189939

5

A critical evaluation of network and pathway-based classifiers for outcome prediction in breast cancer.

Staiger C, Cadot S, Kooter R, Dittrich M, Müller T, Klau GW, Wessels LF. Staiger C, et al. Among authors: klau gw. PLoS One. 2012;7(4):e34796. doi: 10.1371/journal.pone.0034796. Epub 2012 Apr 27. PLoS One. 2012. PMID: 22558100 Free PMC article.

6

Robustness and accuracy of functional modules in integrated network analysis.

Beisser D, Brunkhorst S, Dandekar T, Klau GW, Dittrich MT, Müller T. Beisser D, et al. Among authors: klau gw. Bioinformatics. 2012 Jul 15;28(14):1887-94. doi: 10.1093/bioinformatics/bts265. Epub 2012 May 11. Bioinformatics. 2012. PMID: 22581175

7

Functional module search in protein networks based on semantic similarity improves the analysis of proteomics data.

Boyanova D, Nilla S, Klau GW, Dandekar T, Müller T, Dittrich M. Boyanova D, et al. Among authors: klau gw. Mol Cell Proteomics. 2014 Jul;13(7):1877-89. doi: 10.1074/mcp.M113.032839. Epub 2014 May 7. Mol Cell Proteomics. 2014. PMID: 24807868 Free PMC article.

8

xHeinz: an algorithm for mining cross-species network modules under a flexible conservation model.

El-Kebir M, Soueidan H, Hume T, Beisser D, Dittrich M, Müller T, Blin G, Heringa J, Nikolski M, Wessels LF, Klau GW. El-Kebir M, et al. Among authors: klau gw. Bioinformatics. 2015 Oct 1;31(19):3147-55. doi: 10.1093/bioinformatics/btv316. Epub 2015 May 27. Bioinformatics. 2015. PMID: 26023104

9

NatalieQ: a web server for protein-protein interaction network querying.

El-Kebir M, Brandt BW, Heringa J, Klau GW. El-Kebir M, et al. Among authors: klau gw. BMC Syst Biol. 2014 Apr 1;8:40. doi: 10.1186/1752-0509-8-40. BMC Syst Biol. 2014. PMID: 24690407 Free PMC article.

10

Towards optimal alignment of protein structure distance matrices.

Wohlers I, Domingues FS, Klau GW. Wohlers I, et al. Among authors: klau gw. Bioinformatics. 2010 Sep 15;26(18):2273-80. doi: 10.1093/bioinformatics/btq420. Epub 2010 Jul 17. Bioinformatics. 2010. PMID: 20639543

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