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Page 1
Biological imaging software tools.
Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurman N, Swedlow JR, Tomancak P, Carpenter AE. Eliceiri KW, et al. Among authors: berthold mr. Nat Methods. 2012 Jun 28;9(7):697-710. doi: 10.1038/nmeth.2084. Nat Methods. 2012. PMID: 22743775 Free PMC article.
Integration of the ImageJ Ecosystem in the KNIME Analytics Platform.
Dietz C, Rueden CT, Helfrich S, Dobson ETA, Horn M, Eglinger J, Evans EL 3rd, McLean DT, Novitskaya T, Ricke WA, Sherer NM, Zijlstra A, Berthold MR, Eliceiri KW. Dietz C, et al. Among authors: berthold mr. Front Comput Sci. 2020 Mar;2:8. doi: 10.3389/fcomp.2020.00008. Epub 2020 Mar 17. Front Comput Sci. 2020. PMID: 32905440 Free PMC article.
KNIME for Open-Source Bioimage Analysis: A Tutorial.
Dietz C, Berthold MR. Dietz C, et al. Among authors: berthold mr. Adv Anat Embryol Cell Biol. 2016;219:179-97. doi: 10.1007/978-3-319-28549-8_7. Adv Anat Embryol Cell Biol. 2016. PMID: 27207367
KNIME for reproducible cross-domain analysis of life science data.
Fillbrunn A, Dietz C, Pfeuffer J, Rahn R, Landrum GA, Berthold MR. Fillbrunn A, et al. Among authors: berthold mr. J Biotechnol. 2017 Nov 10;261:149-156. doi: 10.1016/j.jbiotec.2017.07.028. Epub 2017 Jul 27. J Biotechnol. 2017. PMID: 28757290 Free article. Review.
Development of a neural rosette formation assay (RoFA) to identify neurodevelopmental toxicants and to characterize their transcriptome disturbances.
Dreser N, Madjar K, Holzer AK, Kapitza M, Scholz C, Kranaster P, Gutbier S, Klima S, Kolb D, Dietz C, Trefzer T, Meisig J, van Thriel C, Henry M, Berthold MR, Blüthgen N, Sachinidis A, Rahnenführer J, Hengstler JG, Waldmann T, Leist M. Dreser N, et al. Among authors: berthold mr. Arch Toxicol. 2020 Jan;94(1):151-171. doi: 10.1007/s00204-019-02612-5. Epub 2019 Nov 11. Arch Toxicol. 2020. PMID: 31712839
KNIME-CDK: Workflow-driven cheminformatics.
Beisken S, Meinl T, Wiswedel B, de Figueiredo LF, Berthold M, Steinbeck C. Beisken S, et al. BMC Bioinformatics. 2013 Aug 22;14:257. doi: 10.1186/1471-2105-14-257. BMC Bioinformatics. 2013. PMID: 24103053 Free PMC article.
Maximum-score diversity selection for early drug discovery.
Meinl T, Ostermann C, Berthold MR. Meinl T, et al. Among authors: berthold mr. J Chem Inf Model. 2011 Feb 28;51(2):237-47. doi: 10.1021/ci100426r. Epub 2011 Feb 10. J Chem Inf Model. 2011. PMID: 21309543
28 results