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AGORA: Assembly Guided by Optical Restriction Alignment.
Lin HC, Goldstein S, Mendelowitz L, Zhou S, Wetzel J, Schwartz DC, Pop M. Lin HC, et al. Among authors: mendelowitz l. BMC Bioinformatics. 2012 Aug 2;13:189. doi: 10.1186/1471-2105-13-189. BMC Bioinformatics. 2012. PMID: 22856673 Free PMC article.
Maligner: a fast ordered restriction map aligner.
Mendelowitz LM, Schwartz DC, Pop M. Mendelowitz LM, et al. Bioinformatics. 2016 Apr 1;32(7):1016-22. doi: 10.1093/bioinformatics/btv711. Epub 2015 Dec 3. Bioinformatics. 2016. PMID: 26637292 Free PMC article.
Computational methods for optical mapping.
Mendelowitz L, Pop M. Mendelowitz L, et al. Gigascience. 2014 Dec 30;3(1):33. doi: 10.1186/2047-217X-3-33. eCollection 2014. Gigascience. 2014. PMID: 25671093 Free PMC article. Review.