Jenkins JL - Search Results

1

A transition-state interaction shifts nucleobase ionization toward neutrality to facilitate small ribozyme catalysis.

Liberman JA, Guo M, Jenkins JL, Krucinska J, Chen Y, Carey PR, Wedekind JE. Liberman JA, et al. Among authors: jenkins jl. J Am Chem Soc. 2012 Oct 17;134(41):16933-6. doi: 10.1021/ja3070528. Epub 2012 Oct 3. J Am Chem Soc. 2012. PMID: 22989273 Free PMC article.

2

Comparison of a preQ1 riboswitch aptamer in metabolite-bound and free states with implications for gene regulation.

Jenkins JL, Krucinska J, McCarty RM, Bandarian V, Wedekind JE. Jenkins JL, et al. J Biol Chem. 2011 Jul 15;286(28):24626-37. doi: 10.1074/jbc.M111.230375. Epub 2011 May 18. J Biol Chem. 2011. PMID: 21592962 Free PMC article.

3

Crystallographic analysis of small ribozymes and riboswitches.

Lippa GM, Liberman JA, Jenkins JL, Krucinska J, Salim M, Wedekind JE. Lippa GM, et al. Among authors: jenkins jl. Methods Mol Biol. 2012;848:159-84. doi: 10.1007/978-1-61779-545-9_11. Methods Mol Biol. 2012. PMID: 22315069 Free PMC article.

4

ITC analysis of ligand binding to preQ₁ riboswitches.

Liberman JA, Bogue JT, Jenkins JL, Salim M, Wedekind JE. Liberman JA, et al. Among authors: jenkins jl. Methods Enzymol. 2014;549:435-50. doi: 10.1016/B978-0-12-801122-5.00018-0. Methods Enzymol. 2014. PMID: 25432759 Free PMC article.

5

The Quick and the Dead: A Guide to Fast Phasing of Small Ribozyme and Riboswitch Crystal Structures.

Jenkins JL, Wedekind JE. Jenkins JL, et al. Methods Mol Biol. 2016;1490:265-80. doi: 10.1007/978-1-4939-6433-8_17. Methods Mol Biol. 2016. PMID: 27665605

6

Metalloriboswitches: RNA-based inorganic ion sensors that regulate genes.

Wedekind JE, Dutta D, Belashov IA, Jenkins JL. Wedekind JE, et al. Among authors: jenkins jl. J Biol Chem. 2017 Jun 9;292(23):9441-9450. doi: 10.1074/jbc.R117.787713. Epub 2017 Apr 28. J Biol Chem. 2017. PMID: 28455443 Free PMC article. Review.

7

Structure of Sonic Hedgehog protein in complex with zinc(II) and magnesium(II) reveals ion-coordination plasticity relevant to peptide drug design.

Bonn-Breach R, Gu Y, Jenkins J, Fasan R, Wedekind J. Bonn-Breach R, et al. Acta Crystallogr D Struct Biol. 2019 Nov 1;75(Pt 11):969-979. doi: 10.1107/S2059798319012890. Epub 2019 Oct 30. Acta Crystallogr D Struct Biol. 2019. PMID: 31692471 Free PMC article.

8

Analysis of a preQ1-I riboswitch in effector-free and bound states reveals a metabolite-programmed nucleobase-stacking spine that controls gene regulation.

Schroeder GM, Dutta D, Cavender CE, Jenkins JL, Pritchett EM, Baker CD, Ashton JM, Mathews DH, Wedekind JE. Schroeder GM, et al. Among authors: jenkins jl. Nucleic Acids Res. 2020 Aug 20;48(14):8146-8164. doi: 10.1093/nar/gkaa546. Nucleic Acids Res. 2020. PMID: 32597951 Free PMC article.

9

Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.

Chavali SS, Mali SM, Jenkins JL, Fasan R, Wedekind JE. Chavali SS, et al. Among authors: jenkins jl. J Biol Chem. 2020 Dec 4;295(49):16470-16486. doi: 10.1074/jbc.RA120.015444. Epub 2020 Oct 13. J Biol Chem. 2020. PMID: 33051202 Free PMC article.

10

Affinity and Structural Analysis of the U1A RNA Recognition Motif with Engineered Methionines to Improve Experimental Phasing.

Srivastava Y, Bonn-Breach R, Chavali SS, Lippa GM, Jenkins JL, Wedekind JE. Srivastava Y, et al. Among authors: jenkins jl. Crystals (Basel). 2021 Mar;11(3):273. doi: 10.3390/cryst11030273. Epub 2021 Mar 10. Crystals (Basel). 2021. PMID: 33777416 Free PMC article.

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