Lee DY - Search Results

1

Patterns of cis-element enrichment reveal potential regulatory modules involved in the transcriptional regulation of anoxia response of japonica rice.

Mohanty B, Herath V, Wijaya E, Yeo HC, de Los Reyes BG, Lee DY. Mohanty B, et al. Among authors: lee dy. Gene. 2012 Dec 15;511(2):235-42. doi: 10.1016/j.gene.2012.09.048. Epub 2012 Sep 23. Gene. 2012. PMID: 23010196

2

WEbcoli: an interactive and asynchronous web application for in silico design and analysis of genome-scale E.coli model.

Jung TS, Yeo HC, Reddy SG, Cho WS, Lee DY. Jung TS, et al. Among authors: lee dy. Bioinformatics. 2009 Nov 1;25(21):2850-2. doi: 10.1093/bioinformatics/btp496. Epub 2009 Aug 17. Bioinformatics. 2009. PMID: 19689960

3

Enhanced production of neuroprogenitors, dopaminergic neurons, and identification of target genes by overexpression of sonic hedgehog in human embryonic stem cells.

Wu SM, Tan KS, Chen H, Beh TT, Yeo HC, Ng SK, Wei S, Lee DY, Choo AB, Chan KK. Wu SM, et al. Among authors: lee dy. Stem Cells Dev. 2012 Mar 20;21(5):729-41. doi: 10.1089/scd.2011.0134. Epub 2011 Aug 8. Stem Cells Dev. 2012. PMID: 21649559

4

Integrated transcriptome and binding sites analysis implicates E2F in the regulation of self-renewal in human pluripotent stem cells.

Yeo HC, Beh TT, Quek JJ, Koh G, Chan KK, Lee DY. Yeo HC, et al. Among authors: lee dy. PLoS One. 2011;6(11):e27231. doi: 10.1371/journal.pone.0027231. Epub 2011 Nov 4. PLoS One. 2011. PMID: 22076139 Free PMC article.

5

Elucidating rice cell metabolism under flooding and drought stresses using flux-based modeling and analysis.

Lakshmanan M, Zhang Z, Mohanty B, Kwon JY, Choi HY, Nam HJ, Kim DI, Lee DY. Lakshmanan M, et al. Among authors: lee dy. Plant Physiol. 2013 Aug;162(4):2140-50. doi: 10.1104/pp.113.220178. Epub 2013 Jun 10. Plant Physiol. 2013. PMID: 23753178 Free PMC article.

6

Identifying essential genes/reactions of the rice photorespiration by in silico model-based analysis.

Lakshmanan M, Mohanty B, Lee DY. Lakshmanan M, et al. Among authors: lee dy. Rice (N Y). 2013 Aug 13;6(1):20. doi: 10.1186/1939-8433-6-20. Rice (N Y). 2013. PMID: 24280628 Free PMC article.

7

Mechanistic elements and critical factors of cellular reprogramming revealed by stepwise global gene expression analyses.

Park SJ, Yeo HC, Kang NY, Kim H, Lin J, Ha HH, Vendrell M, Lee JS, Chandran Y, Lee DY, Yun SW, Chang YT. Park SJ, et al. Among authors: lee dy, lee js. Stem Cell Res. 2014 May;12(3):730-41. doi: 10.1016/j.scr.2014.03.002. Epub 2014 Mar 25. Stem Cell Res. 2014. PMID: 24727632 Free article.

8

Metabolic and transcriptional regulatory mechanisms underlying the anoxic adaptation of rice coleoptile.

Lakshmanan M, Mohanty B, Lim SH, Ha SH, Lee DY. Lakshmanan M, et al. Among authors: lee dy. AoB Plants. 2014 Jun 3;6:plu026. doi: 10.1093/aobpla/plu026. AoB Plants. 2014. PMID: 24894389 Free PMC article.

9

Upstream regulatory architecture of rice genes: summarizing the baseline towards genus-wide comparative analysis of regulatory networks and allele mining.

de Los Reyes BG, Mohanty B, Yun SJ, Park MR, Lee DY. de Los Reyes BG, et al. Among authors: lee dy. Rice (N Y). 2015 Feb 28;8:14. doi: 10.1186/s12284-015-0041-x. eCollection 2015. Rice (N Y). 2015. PMID: 25844119 Free PMC article.

10

Unraveling the Light-Specific Metabolic and Regulatory Signatures of Rice through Combined in Silico Modeling and Multiomics Analysis.

Lakshmanan M, Lim SH, Mohanty B, Kim JK, Ha SH, Lee DY. Lakshmanan M, et al. Among authors: lee dy. Plant Physiol. 2015 Dec;169(4):3002-20. doi: 10.1104/pp.15.01379. Epub 2015 Oct 9. Plant Physiol. 2015. PMID: 26453433 Free PMC article.

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