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Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes.
Gascoigne DK, Cheetham SW, Cattenoz PB, Clark MB, Amaral PP, Taft RJ, Wilhelm D, Dinger ME, Mattick JS. Gascoigne DK, et al. Among authors: wilhelm d. Bioinformatics. 2012 Dec 1;28(23):3042-50. doi: 10.1093/bioinformatics/bts582. Epub 2012 Oct 7. Bioinformatics. 2012. PMID: 23044541
Expression of distinct RNAs from 3' untranslated regions.
Mercer TR, Wilhelm D, Dinger ME, Soldà G, Korbie DJ, Glazov EA, Truong V, Schwenke M, Simons C, Matthaei KI, Saint R, Koopman P, Mattick JS. Mercer TR, et al. Among authors: wilhelm d. Nucleic Acids Res. 2011 Mar;39(6):2393-403. doi: 10.1093/nar/gkq1158. Epub 2010 Nov 12. Nucleic Acids Res. 2011. PMID: 21075793 Free PMC article.
MicroRNAs-140-5p/140-3p modulate Leydig cell numbers in the developing mouse testis.
Rakoczy J, Fernandez-Valverde SL, Glazov EA, Wainwright EN, Sato T, Takada S, Combes AN, Korbie DJ, Miller D, Grimmond SM, Little MH, Asahara H, Mattick JS, Taft RJ, Wilhelm D. Rakoczy J, et al. Among authors: wilhelm d. Biol Reprod. 2013 Jun 6;88(6):143. doi: 10.1095/biolreprod.113.107607. Print 2013 Jun. Biol Reprod. 2013. PMID: 23616593
Identification of novel markers of mouse fetal ovary development.
Chen H, Palmer JS, Thiagarajan RD, Dinger ME, Lesieur E, Chiu H, Schulz A, Spiller C, Grimmond SM, Little MH, Koopman P, Wilhelm D. Chen H, et al. Among authors: wilhelm d. PLoS One. 2012;7(7):e41683. doi: 10.1371/journal.pone.0041683. Epub 2012 Jul 26. PLoS One. 2012. PMID: 22844512 Free PMC article.
SOX9 regulates microRNA miR-202-5p/3p expression during mouse testis differentiation.
Wainwright EN, Jorgensen JS, Kim Y, Truong V, Bagheri-Fam S, Davidson T, Svingen T, Fernandez-Valverde SL, McClelland KS, Taft RJ, Harley VR, Koopman P, Wilhelm D. Wainwright EN, et al. Among authors: wilhelm d. Biol Reprod. 2013 Aug 15;89(2):34. doi: 10.1095/biolreprod.113.110155. Print 2013 Aug. Biol Reprod. 2013. PMID: 23843232
Non-coding RNAs in mammalian sexual development.
McFarlane L, Wilhelm D. McFarlane L, et al. Among authors: wilhelm d. Sex Dev. 2009;3(6):302-16. doi: 10.1159/000284688. Epub 2010 Feb 23. Sex Dev. 2009. PMID: 20197714 Review.
Sox genes and cancer.
Dong C, Wilhelm D, Koopman P. Dong C, et al. Among authors: wilhelm d. Cytogenet Genome Res. 2004;105(2-4):442-7. doi: 10.1159/000078217. Cytogenet Genome Res. 2004. PMID: 15237232 Review.
425 results