Webb KJ - Search Results

1

Digestion and depletion of abundant proteins improves proteomic coverage.

Fonslow BR, Stein BD, Webb KJ, Xu T, Choi J, Park SK, Yates JR 3rd. Fonslow BR, et al. Among authors: webb kj. Nat Methods. 2013 Jan;10(1):54-6. doi: 10.1038/nmeth.2250. Epub 2012 Nov 18. Nat Methods. 2013. PMID: 23160281 Free PMC article.

2

Modified MuDPIT separation identified 4488 proteins in a system-wide analysis of quiescence in yeast.

Webb KJ, Xu T, Park SK, Yates JR 3rd. Webb KJ, et al. J Proteome Res. 2013 May 3;12(5):2177-84. doi: 10.1021/pr400027m. Epub 2013 Apr 9. J Proteome Res. 2013. PMID: 23540446 Free PMC article.

3

Addendum: Digestion and depletion of abundant proteins improves proteomic coverage.

Fonslow BR, Stein BD, Webb KJ, Xu T, Choi J, Park SK, Yates JR 3rd. Fonslow BR, et al. Among authors: webb kj. Nat Methods. 2014 Mar;11(3):347-8. doi: 10.1038/nmeth0314-347. Nat Methods. 2014. PMID: 24724171 Free PMC article. No abstract available.

4

Eavesdropping on PTM cross-talk through serial enrichment.

Webb K, Bennett EJ. Webb K, et al. Nat Methods. 2013 Jul;10(7):620-1. doi: 10.1038/nmeth.2526. Nat Methods. 2013. PMID: 23807195 No abstract available.

5

Using the Ubiquitin-modified Proteome to Monitor Distinct and Spatially Restricted Protein Homeostasis Dysfunction.

Gendron JM, Webb K, Yang B, Rising L, Zuzow N, Bennett EJ. Gendron JM, et al. Mol Cell Proteomics. 2016 Aug;15(8):2576-93. doi: 10.1074/mcp.M116.058420. Epub 2016 May 16. Mol Cell Proteomics. 2016. PMID: 27185884 Free PMC article.

6

Structural basis for translational surveillance by the large ribosomal subunit-associated protein quality control complex.

Lyumkis D, Oliveira dos Passos D, Tahara EB, Webb K, Bennett EJ, Vinterbo S, Potter CS, Carragher B, Joazeiro CA. Lyumkis D, et al. Proc Natl Acad Sci U S A. 2014 Nov 11;111(45):15981-6. doi: 10.1073/pnas.1413882111. Epub 2014 Oct 27. Proc Natl Acad Sci U S A. 2014. PMID: 25349383 Free PMC article.

7

The Unfolded Protein Response Triggers Site-Specific Regulatory Ubiquitylation of 40S Ribosomal Proteins.

Higgins R, Gendron JM, Rising L, Mak R, Webb K, Kaiser SE, Zuzow N, Riviere P, Yang B, Fenech E, Tang X, Lindsay SA, Christianson JC, Hampton RY, Wasserman SA, Bennett EJ. Higgins R, et al. Mol Cell. 2015 Jul 2;59(1):35-49. doi: 10.1016/j.molcel.2015.04.026. Epub 2015 Jun 4. Mol Cell. 2015. PMID: 26051182 Free PMC article.

8

Decoys Untangle Complicated Redundancy and Reveal Targets of Circadian Clock F-Box Proteins.

Lee CM, Feke A, Li MW, Adamchek C, Webb K, Pruneda-Paz J, Bennett EJ, Kay SA, Gendron JM. Lee CM, et al. Plant Physiol. 2018 Jul;177(3):1170-1186. doi: 10.1104/pp.18.00331. Epub 2018 May 23. Plant Physiol. 2018. PMID: 29794020 Free PMC article.

9

Recruitment of the 4EHP-GYF2 cap-binding complex to tetraproline motifs of tristetraprolin promotes repression and degradation of mRNAs with AU-rich elements.

Fu R, Olsen MT, Webb K, Bennett EJ, Lykke-Andersen J. Fu R, et al. RNA. 2016 Mar;22(3):373-82. doi: 10.1261/rna.054833.115. Epub 2016 Jan 13. RNA. 2016. PMID: 26763119 Free PMC article.

10

Multimodal mechanism of action for the Cdc34 acidic loop: a case study for why ubiquitin-conjugating enzymes have loops and tails.

Ziemba A, Hill S, Sandoval D, Webb K, Bennett EJ, Kleiger G. Ziemba A, et al. J Biol Chem. 2013 Nov 29;288(48):34882-96. doi: 10.1074/jbc.M113.509190. Epub 2013 Oct 15. J Biol Chem. 2013. PMID: 24129577 Free PMC article.

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