Rokas A - Search Results

1

The diverse applications of RNA-seq for functional genomic studies in Aspergillus fumigatus.

Rokas A, Gibbons JG, Zhou X, Beauvais A, Latgé JP. Rokas A, et al. Ann N Y Acad Sci. 2012 Dec;1273(1):25-34. doi: 10.1111/j.1749-6632.2012.06755.x. Ann N Y Acad Sci. 2012. PMID: 23230834 Free PMC article.

2

Comparative and functional characterization of intragenic tandem repeats in 10 Aspergillus genomes.

Gibbons JG, Rokas A. Gibbons JG, et al. Among authors: rokas a. Mol Biol Evol. 2009 Mar;26(3):591-602. doi: 10.1093/molbev/msn277. Epub 2008 Dec 4. Mol Biol Evol. 2009. PMID: 19056904

3

Benchmarking next-generation transcriptome sequencing for functional and evolutionary genomics.

Gibbons JG, Janson EM, Hittinger CT, Johnston M, Abbot P, Rokas A. Gibbons JG, et al. Among authors: rokas a. Mol Biol Evol. 2009 Dec;26(12):2731-44. doi: 10.1093/molbev/msp188. Epub 2009 Aug 25. Mol Biol Evol. 2009. PMID: 19706727

4

Complete bacteriophage transfer in a bacterial endosymbiont (Wolbachia) determined by targeted genome capture.

Kent BN, Salichos L, Gibbons JG, Rokas A, Newton IL, Clark ME, Bordenstein SR. Kent BN, et al. Among authors: rokas a. Genome Biol Evol. 2011;3:209-18. doi: 10.1093/gbe/evr007. Epub 2011 Feb 2. Genome Biol Evol. 2011. PMID: 21292630 Free PMC article.

5

Global transcriptome changes underlying colony growth in the opportunistic human pathogen Aspergillus fumigatus.

Gibbons JG, Beauvais A, Beau R, McGary KL, Latgé JP, Rokas A. Gibbons JG, et al. Among authors: rokas a. Eukaryot Cell. 2012 Jan;11(1):68-78. doi: 10.1128/EC.05102-11. Epub 2011 Jul 1. Eukaryot Cell. 2012. PMID: 21724936 Free PMC article.

6

Evidence for genetic differentiation and variable recombination rates among Dutch populations of the opportunistic human pathogen Aspergillus fumigatus.

Klaassen CH, Gibbons JG, Fedorova ND, Meis JF, Rokas A. Klaassen CH, et al. Among authors: rokas a. Mol Ecol. 2012 Jan;21(1):57-70. doi: 10.1111/j.1365-294X.2011.05364.x. Epub 2011 Nov 22. Mol Ecol. 2012. PMID: 22106836 Free PMC article.

7

Transcriptome-wide analysis of small RNA expression in early zebrafish development.

Wei C, Salichos L, Wittgrove CM, Rokas A, Patton JG. Wei C, et al. Among authors: rokas a. RNA. 2012 May;18(5):915-29. doi: 10.1261/rna.029090.111. Epub 2012 Mar 8. RNA. 2012. PMID: 22408181 Free PMC article.

8

Transcriptome of the adult female malaria mosquito vector Anopheles albimanus.

Martínez-Barnetche J, Gómez-Barreto RE, Ovilla-Muñoz M, Téllez-Sosa J, García López DE, Dinglasan RR, Ubaida Mohien C, MacCallum RM, Redmond SN, Gibbons JG, Rokas A, Machado CA, Cazares-Raga FE, González-Cerón L, Hernández-Martínez S, Rodríguez López MH. Martínez-Barnetche J, et al. Among authors: rokas a. BMC Genomics. 2012 May 30;13:207. doi: 10.1186/1471-2164-13-207. BMC Genomics. 2012. PMID: 22646700 Free PMC article.

9

The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae.

Gibbons JG, Salichos L, Slot JC, Rinker DC, McGary KL, King JG, Klich MA, Tabb DL, McDonald WH, Rokas A. Gibbons JG, et al. Among authors: rokas a. Curr Biol. 2012 Aug 7;22(15):1403-9. doi: 10.1016/j.cub.2012.05.033. Epub 2012 Jul 12. Curr Biol. 2012. PMID: 22795693 Free PMC article.

10

Phylogenetic and transcriptomic analysis of chemosensory receptors in a pair of divergent ant species reveals sex-specific signatures of odor coding.

Zhou X, Slone JD, Rokas A, Berger SL, Liebig J, Ray A, Reinberg D, Zwiebel LJ. Zhou X, et al. Among authors: rokas a. PLoS Genet. 2012;8(8):e1002930. doi: 10.1371/journal.pgen.1002930. Epub 2012 Aug 30. PLoS Genet. 2012. PMID: 22952454 Free PMC article.

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