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Advanced techniques for constrained internal coordinate molecular dynamics.
J Comput Chem. 2013 Apr 30;34(11):904-14. doi: 10.1002/jcc.23200. Epub 2013 Jan 23.
J Comput Chem. 2013.
PMID: 23345138
Free PMC article.
Folding of small proteins using constrained molecular dynamics.
Balaraman GS, Park IH, Jain A, Vaidehi N.
Balaraman GS, et al.
J Phys Chem B. 2011 Jun 16;115(23):7588-96. doi: 10.1021/jp200414z. Epub 2011 May 18.
J Phys Chem B. 2011.
PMID: 21591767
Free PMC article.
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Structural insights into conformational stability of wild-type and mutant beta1-adrenergic receptor.
Balaraman GS, Bhattacharya S, Vaidehi N.
Balaraman GS, et al.
Biophys J. 2010 Jul 21;99(2):568-77. doi: 10.1016/j.bpj.2010.04.075.
Biophys J. 2010.
PMID: 20643076
Free PMC article.
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Critical analysis of the successes and failures of homology models of G protein-coupled receptors.
Bhattacharya S, Lam AR, Li H, Balaraman G, Niesen MJ, Vaidehi N.
Bhattacharya S, et al.
Proteins. 2013 May;81(5):729-39. doi: 10.1002/prot.24195. Epub 2013 Feb 14.
Proteins. 2013.
PMID: 23042299
Free PMC article.
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