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A new method to reconstruct recombination events at a genomic scale.
Melé M, Javed A, Pybus M, Calafell F, Parida L, Bertranpetit J; Genographic Consortium Members. Melé M, et al. Among authors: parida l. PLoS Comput Biol. 2010 Nov 24;6(11):e1001010. doi: 10.1371/journal.pcbi.1001010. PLoS Comput Biol. 2010. PMID: 21124860 Free PMC article.
IRiS: construction of ARG networks at genomic scales.
Javed A, Pybus M, Melé M, Utro F, Bertranpetit J, Calafell F, Parida L. Javed A, et al. Among authors: parida l. Bioinformatics. 2011 Sep 1;27(17):2448-50. doi: 10.1093/bioinformatics/btr423. Epub 2011 Jul 15. Bioinformatics. 2011. PMID: 21765095
Recombination gives a new insight in the effective population size and the history of the old world human populations.
Melé M, Javed A, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Pitchappan RM, Arunkumar G, Parida L, Calafell F, Bertranpetit J; Genographic Consortium. Melé M, et al. Among authors: parida l. Mol Biol Evol. 2012 Jan;29(1):25-30. doi: 10.1093/molbev/msr213. Epub 2011 Sep 1. Mol Biol Evol. 2012. PMID: 21890475
Recombination networks as genetic markers in a human variation study of the Old World.
Javed A, Melé M, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Arunkumar G, Pitchappan R, Bertranpetit J, Calafell F, Parida L; Genographic Consortium. Javed A, et al. Among authors: parida l. Hum Genet. 2012 Apr;131(4):601-13. doi: 10.1007/s00439-011-1104-8. Epub 2011 Oct 18. Hum Genet. 2012. PMID: 22006219
ARG-based genome-wide analysis of cacao cultivars.
Utro F, Cornejo OE, Livingstone D, Motamayor JC, Parida L. Utro F, et al. Among authors: parida l. BMC Bioinformatics. 2012;13 Suppl 19(Suppl 19):S17. doi: 10.1186/1471-2105-13-S19-S17. Epub 2012 Dec 19. BMC Bioinformatics. 2012. PMID: 23281769 Free PMC article.
The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
Motamayor JC, Mockaitis K, Schmutz J, Haiminen N, Livingstone D 3rd, Cornejo O, Findley SD, Zheng P, Utro F, Royaert S, Saski C, Jenkins J, Podicheti R, Zhao M, Scheffler BE, Stack JC, Feltus FA, Mustiga GM, Amores F, Phillips W, Marelli JP, May GD, Shapiro H, Ma J, Bustamante CD, Schnell RJ, Main D, Gilbert D, Parida L, Kuhn DN. Motamayor JC, et al. Among authors: parida l. Genome Biol. 2013 Jun 3;14(6):r53. doi: 10.1186/gb-2013-14-6-r53. Genome Biol. 2013. PMID: 23731509 Free PMC article.
190 results