Frase AT - Search Results

1

Using BioBin to explore rare variant population stratification.

Moore CB, Wallace JR, Frase AT, Pendergrass SA, Ritchie MD. Moore CB, et al. Among authors: frase at. Pac Symp Biocomput. 2013:332-43. Pac Symp Biocomput. 2013. PMID: 23424138 Free PMC article.

2

Phenome-wide association study (PheWAS) for detection of pleiotropy within the Population Architecture using Genomics and Epidemiology (PAGE) Network.

Pendergrass SA, Brown-Gentry K, Dudek S, Frase A, Torstenson ES, Goodloe R, Ambite JL, Avery CL, Buyske S, Bůžková P, Deelman E, Fesinmeyer MD, Haiman CA, Heiss G, Hindorff LA, Hsu CN, Jackson RD, Kooperberg C, Le Marchand L, Lin Y, Matise TC, Monroe KR, Moreland L, Park SL, Reiner A, Wallace R, Wilkens LR, Crawford DC, Ritchie MD. Pendergrass SA, et al. PLoS Genet. 2013;9(1):e1003087. doi: 10.1371/journal.pgen.1003087. Epub 2013 Jan 31. PLoS Genet. 2013. PMID: 23382687 Free PMC article.

3

ATHENA: a tool for meta-dimensional analysis applied to genotypes and gene expression data to predict HDL cholesterol levels.

Holzinger ER, Dudek SM, Frase AT, Krauss RM, Medina MW, Ritchie MD. Holzinger ER, et al. Among authors: frase at. Pac Symp Biocomput. 2013:385-96. Pac Symp Biocomput. 2013. PMID: 23424143 Free PMC article.

4

BioBin: a bioinformatics tool for automating the binning of rare variants using publicly available biological knowledge.

Moore CB, Wallace JR, Frase AT, Pendergrass SA, Ritchie MD. Moore CB, et al. Among authors: frase at. BMC Med Genomics. 2013;6 Suppl 2(Suppl 2):S6. doi: 10.1186/1755-8794-6-S2-S6. Epub 2013 May 7. BMC Med Genomics. 2013. PMID: 23819467 Free PMC article.

5

ATHENA: the analysis tool for heritable and environmental network associations.

Holzinger ER, Dudek SM, Frase AT, Pendergrass SA, Ritchie MD. Holzinger ER, et al. Among authors: frase at. Bioinformatics. 2014 Mar 1;30(5):698-705. doi: 10.1093/bioinformatics/btt572. Epub 2013 Oct 21. Bioinformatics. 2014. PMID: 24149050 Free PMC article.

6

Genomic analyses with biofilter 2.0: knowledge driven filtering, annotation, and model development.

Pendergrass SA, Frase A, Wallace J, Wolfe D, Katiyar N, Moore C, Ritchie MD. Pendergrass SA, et al. BioData Min. 2013 Dec 30;6(1):25. doi: 10.1186/1756-0381-6-25. BioData Min. 2013. PMID: 24378202 Free PMC article.

7

Low frequency variants, collapsed based on biological knowledge, uncover complexity of population stratification in 1000 genomes project data.

Moore CB, Wallace JR, Wolfe DJ, Frase AT, Pendergrass SA, Weiss KM, Ritchie MD. Moore CB, et al. Among authors: frase at. PLoS Genet. 2013;9(12):e1003959. doi: 10.1371/journal.pgen.1003959. Epub 2013 Dec 26. PLoS Genet. 2013. PMID: 24385916 Free PMC article.

8

Knowledge-driven genomic interactions: an application in ovarian cancer.

Kim D, Li R, Dudek SM, Frase AT, Pendergrass SA, Ritchie MD. Kim D, et al. Among authors: frase at. BioData Min. 2014 Sep 9;7:20. doi: 10.1186/1756-0381-7-20. eCollection 2014. BioData Min. 2014. PMID: 25214892 Free PMC article.

9

PHENOME-WIDE INTERACTION STUDY (PheWIS) IN AIDS CLINICAL TRIALS GROUP DATA (ACTG).

Verma SS, Frase AT, Verma A, Pendergrass SA, Mahony S, Haas DW, Ritchie MD. Verma SS, et al. Among authors: frase at. Pac Symp Biocomput. 2016;21:57-68. Pac Symp Biocomput. 2016. PMID: 26776173 Free PMC article.

10

INTEGRATING CLINICAL LABORATORY MEASURES AND ICD-9 CODE DIAGNOSES IN PHENOME-WIDE ASSOCIATION STUDIES.

Verma A, Leader JB, Verma SS, Frase A, Wallace J, Dudek S, Lavage DR, Van Hout CV, Dewey FE, Penn J, Lopez A, Overton JD, Carey DJ, Ledbetter DH, Kirchner HL, Ritchie MD, Pendergrass SA. Verma A, et al. Pac Symp Biocomput. 2016;21:168-79. Pac Symp Biocomput. 2016. PMID: 26776183 Free PMC article.

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