Halvey PJ - Search Results

1

Integrative omics analysis reveals the importance and scope of translational repression in microRNA-mediated regulation.

Liu Q, Halvey PJ, Shyr Y, Slebos RJ, Liebler DC, Zhang B. Liu Q, et al. Among authors: halvey pj. Mol Cell Proteomics. 2013 Jul;12(7):1900-11. doi: 10.1074/mcp.M112.025783. Epub 2013 Apr 2. Mol Cell Proteomics. 2013. PMID: 23550052 Free PMC article.

2

A bioinformatics workflow for variant peptide detection in shotgun proteomics.

Li J, Su Z, Ma ZQ, Slebos RJ, Halvey P, Tabb DL, Liebler DC, Pao W, Zhang B. Li J, et al. Mol Cell Proteomics. 2011 May;10(5):M110.006536. doi: 10.1074/mcp.M110.006536. Epub 2011 Mar 9. Mol Cell Proteomics. 2011. PMID: 21389108 Free PMC article.

3

Protein identification using customized protein sequence databases derived from RNA-Seq data.

Wang X, Slebos RJ, Wang D, Halvey PJ, Tabb DL, Liebler DC, Zhang B. Wang X, et al. Among authors: halvey pj. J Proteome Res. 2012 Feb 3;11(2):1009-17. doi: 10.1021/pr200766z. Epub 2011 Dec 14. J Proteome Res. 2012. PMID: 22103967 Free PMC article.

4

Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair.

Halvey PJ, Wang X, Wang J, Bhat AA, Dhawan P, Li M, Zhang B, Liebler DC, Slebos RJ. Halvey PJ, et al. Cancer Res. 2014 Jan 1;74(1):387-97. doi: 10.1158/0008-5472.CAN-13-2488. Epub 2013 Nov 18. Cancer Res. 2014. PMID: 24247723 Free PMC article.

5

Proteomic consequences of a single gene mutation in a colorectal cancer model.

Halvey PJ, Zhang B, Coffey RJ, Liebler DC, Slebos RJ. Halvey PJ, et al. J Proteome Res. 2012 Feb 3;11(2):1184-95. doi: 10.1021/pr2009109. Epub 2011 Dec 13. J Proteome Res. 2012. PMID: 22103262 Free PMC article.

6

A Reporter System for Translational Readthrough of Stop Codons in Human Cells.

Halvey PJ, Liebler DC, Slebos RJ. Halvey PJ, et al. FEBS Open Bio. 2012 Dec;2:56-59. doi: 10.1016/j.fob.2012.04.004. Epub 2012 Apr 17. FEBS Open Bio. 2012. PMID: 22563532 Free PMC article.

7

GeLC-MRM quantitation of mutant KRAS oncoprotein in complex biological samples.

Halvey PJ, Ferrone CR, Liebler DC. Halvey PJ, et al. J Proteome Res. 2012 Jul 6;11(7):3908-13. doi: 10.1021/pr300161j. Epub 2012 Jun 26. J Proteome Res. 2012. PMID: 22671702 Free PMC article.

8

Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.

Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ. Demory Beckler M, et al. Among authors: halvey pj. Mol Cell Proteomics. 2013 Feb;12(2):343-55. doi: 10.1074/mcp.M112.022806. Epub 2012 Nov 15. Mol Cell Proteomics. 2013. PMID: 23161513 Free PMC article.

9

Attenuation of the beta-catenin/TCF4 complex in colorectal cancer cells induces several growth-suppressive microRNAs that target cancer promoting genes.

Schepeler T, Holm A, Halvey P, Nordentoft I, Lamy P, Riising EM, Christensen LL, Thorsen K, Liebler DC, Helin K, Ørntoft TF, Andersen CL. Schepeler T, et al. Oncogene. 2012 May 31;31(22):2750-60. doi: 10.1038/onc.2011.453. Epub 2011 Oct 3. Oncogene. 2012. PMID: 21963845

10

IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering.

Ma ZQ, Dasari S, Chambers MC, Litton MD, Sobecki SM, Zimmerman LJ, Halvey PJ, Schilling B, Drake PM, Gibson BW, Tabb DL. Ma ZQ, et al. Among authors: halvey pj. J Proteome Res. 2009 Aug;8(8):3872-81. doi: 10.1021/pr900360j. J Proteome Res. 2009. PMID: 19522537 Free PMC article.

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