Fadda A - Search Results

1

Post-transcriptional regulation of the trypanosome heat shock response by a zinc finger protein.

Droll D, Minia I, Fadda A, Singh A, Stewart M, Queiroz R, Clayton C. Droll D, et al. Among authors: fadda a. PLoS Pathog. 2013;9(4):e1003286. doi: 10.1371/journal.ppat.1003286. Epub 2013 Apr 4. PLoS Pathog. 2013. PMID: 23592996 Free PMC article.

2

The roles of 3'-exoribonucleases and the exosome in trypanosome mRNA degradation.

Fadda A, Färber V, Droll D, Clayton C. Fadda A, et al. RNA. 2013 Jul;19(7):937-47. doi: 10.1261/rna.038430.113. Epub 2013 May 22. RNA. 2013. PMID: 23697549 Free PMC article.

3

Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networks.

Singh A, Minia I, Droll D, Fadda A, Clayton C, Erben E. Singh A, et al. Among authors: fadda a. Nucleic Acids Res. 2014 Apr;42(7):4652-68. doi: 10.1093/nar/gkt1416. Epub 2014 Jan 26. Nucleic Acids Res. 2014. PMID: 24470144 Free PMC article.

4

Depletion of the Trypanosome Pumilio domain protein PUF2 or of some other essential proteins causes transcriptome changes related to coding region length.

Jha BA, Fadda A, Merce C, Mugo E, Droll D, Clayton C. Jha BA, et al. Among authors: fadda a. Eukaryot Cell. 2014 May;13(5):664-74. doi: 10.1128/EC.00018-14. Epub 2014 Mar 28. Eukaryot Cell. 2014. PMID: 24681684 Free PMC article.

5

A genome-wide tethering screen reveals novel potential post-transcriptional regulators in Trypanosoma brucei.

Erben ED, Fadda A, Lueong S, Hoheisel JD, Clayton C. Erben ED, et al. Among authors: fadda a. PLoS Pathog. 2014 Jun 12;10(6):e1004178. doi: 10.1371/journal.ppat.1004178. eCollection 2014 Jun. PLoS Pathog. 2014. PMID: 24945722 Free PMC article.

6

Transcriptome-wide analysis of trypanosome mRNA decay reveals complex degradation kinetics and suggests a role for co-transcriptional degradation in determining mRNA levels.

Fadda A, Ryten M, Droll D, Rojas F, Färber V, Haanstra JR, Merce C, Bakker BM, Matthews K, Clayton C. Fadda A, et al. Mol Microbiol. 2014 Oct;94(2):307-26. doi: 10.1111/mmi.12764. Epub 2014 Sep 15. Mol Microbiol. 2014. PMID: 25145465 Free PMC article.

7

The role of the 5'-3' exoribonuclease XRNA in transcriptome-wide mRNA degradation.

Manful T, Fadda A, Clayton C. Manful T, et al. Among authors: fadda a. RNA. 2011 Nov;17(11):2039-47. doi: 10.1261/rna.2837311. Epub 2011 Sep 26. RNA. 2011. PMID: 21947264 Free PMC article.

8

Depletion of trypanosome CTR9 leads to gene expression defects.

Ouna BA, Nyambega B, Manful T, Helbig C, Males M, Fadda A, Clayton C. Ouna BA, et al. Among authors: fadda a. PLoS One. 2012;7(4):e34256. doi: 10.1371/journal.pone.0034256. Epub 2012 Apr 20. PLoS One. 2012. PMID: 22532828 Free PMC article.

9

The silicon trypanosome: a test case of iterative model extension in systems biology.

Achcar F, Fadda A, Haanstra JR, Kerkhoven EJ, Kim DH, Leroux AE, Papamarkou T, Rojas F, Bakker BM, Barrett MP, Clayton C, Girolami M, Krauth-Siegel RL, Matthews KR, Breitling R. Achcar F, et al. Among authors: fadda a. Adv Microb Physiol. 2014;64:115-43. doi: 10.1016/B978-0-12-800143-1.00003-8. Adv Microb Physiol. 2014. PMID: 24797926 Free PMC article. Review.

10

Methods to determine the transcriptomes of trypanosomes in mixtures with mammalian cells: the effects of parasite purification and selective cDNA amplification.

Mulindwa J, Fadda A, Merce C, Matovu E, Enyaru J, Clayton C. Mulindwa J, et al. Among authors: fadda a. PLoS Negl Trop Dis. 2014 Apr 17;8(4):e2806. doi: 10.1371/journal.pntd.0002806. eCollection 2014 Apr. PLoS Negl Trop Dis. 2014. PMID: 24743343 Free PMC article.

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