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The duck genome and transcriptome provide insight into an avian influenza virus reservoir species.
Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y, Li J, Yi K, Feng H, Zhu P, Li B, Liu Q, Fairley S, Magor KE, Du Z, Hu X, Goodman L, Tafer H, Vignal A, Lee T, Kim KW, Sheng Z, An Y, Searle S, Herrero J, Groenen MAM, Crooijmans RPMA, Faraut T, Cai Q, Webster RG, Aldridge JR, Warren WC, Bartschat S, Kehr S, Marz M, Stadler PF, Smith J, Kraus RHS, Zhao Y, Ren L, Fei J, Morisson M, Kaiser P, Griffin DK, Rao M, Pitel F, Wang J, Li N. Huang Y, et al. Among authors: stadler pf. Nat Genet. 2013 Jul;45(7):776-783. doi: 10.1038/ng.2657. Epub 2013 Jun 9. Nat Genet. 2013. PMID: 23749191 Free PMC article.
Thermodynamics of RNA-RNA binding.
Mückstein U, Tafer H, Hackermüller J, Bernhart SH, Stadler PF, Hofacker IL. Mückstein U, et al. Among authors: stadler pf. Bioinformatics. 2006 May 15;22(10):1177-82. doi: 10.1093/bioinformatics/btl024. Epub 2006 Jan 29. Bioinformatics. 2006. PMID: 16446276
Partition function and base pairing probabilities of RNA heterodimers.
Bernhart SH, Tafer H, Mückstein U, Flamm C, Stadler PF, Hofacker IL. Bernhart SH, et al. Among authors: stadler pf. Algorithms Mol Biol. 2006 Mar 16;1(1):3. doi: 10.1186/1748-7188-1-3. Algorithms Mol Biol. 2006. PMID: 16722605 Free PMC article.
Invertebrate 7SK snRNAs.
Gruber AR, Koper-Emde D, Marz M, Tafer H, Bernhart S, Obernosterer G, Mosig A, Hofacker IL, Stadler PF, Benecke BJ. Gruber AR, et al. Among authors: stadler pf. J Mol Evol. 2008 Feb;66(2):107-15. doi: 10.1007/s00239-007-9052-6. Epub 2008 Jan 12. J Mol Evol. 2008. PMID: 18193315 Free PMC article.
U7 snRNAs: a computational survey.
Marz M, Mosig A, Stadler BM, Stadler PF. Marz M, et al. Among authors: stadler pf, stadler bm. Genomics Proteomics Bioinformatics. 2007 Dec;5(3-4):187-95. doi: 10.1016/S1672-0229(08)60006-6. Genomics Proteomics Bioinformatics. 2007. PMID: 18267300 Free PMC article.
A survey of nematode SmY RNAs.
Jones TA, Otto W, Marz M, Eddy SR, Stadler PF. Jones TA, et al. Among authors: stadler pf. RNA Biol. 2009 Jan-Mar;6(1):5-8. doi: 10.4161/rna.6.1.7634. Epub 2009 Jan 26. RNA Biol. 2009. PMID: 19106623 Free article. Review.
Non-coding RNA annotation of the genome of Trichoplax adhaerens.
Hertel J, de Jong D, Marz M, Rose D, Tafer H, Tanzer A, Schierwater B, Stadler PF. Hertel J, et al. Among authors: stadler pf. Nucleic Acids Res. 2009 Apr;37(5):1602-15. doi: 10.1093/nar/gkn1084. Epub 2009 Jan 16. Nucleic Acids Res. 2009. PMID: 19151082 Free PMC article.
Evolution of 7SK RNA and its protein partners in metazoa.
Marz M, Donath A, Verstraete N, Nguyen VT, Stadler PF, Bensaude O. Marz M, et al. Among authors: stadler pf. Mol Biol Evol. 2009 Dec;26(12):2821-30. doi: 10.1093/molbev/msp198. Epub 2009 Sep 4. Mol Biol Evol. 2009. PMID: 19734296
Comparative analysis of eukaryotic U3 snoRNA.
Marz M, Stadler PF. Marz M, et al. Among authors: stadler pf. RNA Biol. 2009 Nov-Dec;6(5):503-7. doi: 10.4161/rna.6.5.9607. RNA Biol. 2009. PMID: 19875933 Free article. Review.
606 results