Kowalczyk A - Search Results

1

Accurate and robust genomic prediction of celiac disease using statistical learning.

Abraham G, Tye-Din JA, Bhalala OG, Kowalczyk A, Zobel J, Inouye M. Abraham G, et al. Among authors: kowalczyk a. PLoS Genet. 2014 Feb 13;10(2):e1004137. doi: 10.1371/journal.pgen.1004137. eCollection 2014 Feb. PLoS Genet. 2014. PMID: 24550740 Free PMC article.

2

SparSNP: fast and memory-efficient analysis of all SNPs for phenotype prediction.

Abraham G, Kowalczyk A, Zobel J, Inouye M. Abraham G, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2012 May 10;13:88. doi: 10.1186/1471-2105-13-88. BMC Bioinformatics. 2012. PMID: 22574887 Free PMC article.

3

Performance and robustness of penalized and unpenalized methods for genetic prediction of complex human disease.

Abraham G, Kowalczyk A, Zobel J, Inouye M. Abraham G, et al. Among authors: kowalczyk a. Genet Epidemiol. 2013 Feb;37(2):184-95. doi: 10.1002/gepi.21698. Epub 2012 Nov 30. Genet Epidemiol. 2013. PMID: 23203348

4

Interactions within the MHC contribute to the genetic architecture of celiac disease.

Goudey B, Abraham G, Kikianty E, Wang Q, Rawlinson D, Shi F, Haviv I, Stern L, Kowalczyk A, Inouye M. Goudey B, et al. Among authors: kowalczyk a. PLoS One. 2017 Mar 10;12(3):e0172826. doi: 10.1371/journal.pone.0172826. eCollection 2017. PLoS One. 2017. PMID: 28282431 Free PMC article.

5

Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context.

Abraham G, Kowalczyk A, Loi S, Haviv I, Zobel J. Abraham G, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2010 May 25;11:277. doi: 10.1186/1471-2105-11-277. BMC Bioinformatics. 2010. PMID: 20500821 Free PMC article.

6

Exploring effective approaches for haplotype block phasing.

Al Bkhetan Z, Zobel J, Kowalczyk A, Verspoor K, Goudey B. Al Bkhetan Z, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2019 Oct 30;20(1):540. doi: 10.1186/s12859-019-3095-8. BMC Bioinformatics. 2019. PMID: 31666002 Free PMC article.

7

GWIS--model-free, fast and exhaustive search for epistatic interactions in case-control GWAS.

Goudey B, Rawlinson D, Wang Q, Shi F, Ferra H, Campbell RM, Stern L, Inouye MT, Ong CS, Kowalczyk A. Goudey B, et al. Among authors: kowalczyk a. BMC Genomics. 2013;14 Suppl 3(Suppl 3):S10. doi: 10.1186/1471-2164-14-S3-S10. Epub 2013 May 28. BMC Genomics. 2013. PMID: 23819779 Free PMC article.

8

Meta-analysis of gene expression microarrays with missing replicates.

Shi F, Abraham G, Leckie C, Haviv I, Kowalczyk A. Shi F, et al. Among authors: kowalczyk a. BMC Bioinformatics. 2011 Mar 24;12:84. doi: 10.1186/1471-2105-12-84. BMC Bioinformatics. 2011. PMID: 21435268 Free PMC article.

9

Improved HLA-based prediction of coeliac disease identifies two novel genetic interactions.

Erlichster M, Bedo J, Skafidas E, Kwan P, Kowalczyk A, Goudey B. Erlichster M, et al. Among authors: kowalczyk a. Eur J Hum Genet. 2020 Dec;28(12):1743-1752. doi: 10.1038/s41431-020-0700-2. Epub 2020 Jul 30. Eur J Hum Genet. 2020. PMID: 32733071 Free PMC article.

10

Use of a Novel Nonparametric Version of DEPTH to Identify Genomic Regions Associated with Prostate Cancer Risk.

MacInnis RJ, Schmidt DF, Makalic E, Severi G, FitzGerald LM, Reumann M, Kapuscinski MK, Kowalczyk A, Zhou Z, Goudey B, Qian G, Bui QM, Park DJ, Freeman A, Southey MC, Al Olama AA, Kote-Jarai Z, Eeles RA, Hopper JL, Giles GG; UK Genetic Prostate Cancer Study Collaborators. MacInnis RJ, et al. Among authors: kowalczyk a. Cancer Epidemiol Biomarkers Prev. 2016 Dec;25(12):1619-1624. doi: 10.1158/1055-9965.EPI-16-0301. Epub 2016 Aug 18. Cancer Epidemiol Biomarkers Prev. 2016. PMID: 27539266 Free PMC article.

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