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A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication.
Kai W, Nomura K, Fujiwara A, Nakamura Y, Yasuike M, Ojima N, Masaoka T, Ozaki A, Kazeto Y, Gen K, Nagao J, Tanaka H, Kobayashi T, Ototake M. Kai W, et al. Among authors: fujiwara a. BMC Genomics. 2014 Mar 26;15:233. doi: 10.1186/1471-2164-15-233. BMC Genomics. 2014. PMID: 24669946 Free PMC article.
V-GAP: Viral genome assembly pipeline.
Nakamura Y, Yasuike M, Nishiki I, Iwasaki Y, Fujiwara A, Kawato Y, Nakai T, Nagai S, Kobayashi T, Gojobori T, Ototake M. Nakamura Y, et al. Among authors: fujiwara a. Gene. 2016 Feb 1;576(2 Pt 1):676-80. doi: 10.1016/j.gene.2015.10.029. Epub 2015 Oct 22. Gene. 2016. PMID: 26475935 Free article.
A genetic linkage map for the tiger pufferfish, Takifugu rubripes.
Kai W, Kikuchi K, Fujita M, Suetake H, Fujiwara A, Yoshiura Y, Ototake M, Venkatesh B, Miyaki K, Suzuki Y. Kai W, et al. Among authors: fujiwara a. Genetics. 2005 Sep;171(1):227-38. doi: 10.1534/genetics.105.042051. Epub 2005 Jun 21. Genetics. 2005. PMID: 15972462 Free PMC article.
Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna.
Nakamura Y, Mori K, Saitoh K, Oshima K, Mekuchi M, Sugaya T, Shigenobu Y, Ojima N, Muta S, Fujiwara A, Yasuike M, Oohara I, Hirakawa H, Chowdhury VS, Kobayashi T, Nakajima K, Sano M, Wada T, Tashiro K, Ikeo K, Hattori M, Kuhara S, Gojobori T, Inouye K. Nakamura Y, et al. Among authors: fujiwara a. Proc Natl Acad Sci U S A. 2013 Jul 2;110(27):11061-6. doi: 10.1073/pnas.1302051110. Epub 2013 Jun 18. Proc Natl Acad Sci U S A. 2013. PMID: 23781100 Free PMC article.
Effective de novo assembly of fish genome using haploid larvae.
Iwasaki Y, Nishiki I, Nakamura Y, Yasuike M, Kai W, Nomura K, Yoshida K, Nomura Y, Fujiwara A, Kobayashi T, Ototake M. Iwasaki Y, et al. Among authors: fujiwara a. Gene. 2016 Feb 1;576(2 Pt 1):644-9. doi: 10.1016/j.gene.2015.10.015. Epub 2015 Oct 23. Gene. 2016. PMID: 26478467 Free article.
866 results