Pagala V - Search Results

1

Integrated approaches for analyzing U1-70K cleavage in Alzheimer's disease.

Bai B, Chen PC, Hales CM, Wu Z, Pagala V, High AA, Levey AI, Lah JJ, Peng J. Bai B, et al. Among authors: pagala v. J Proteome Res. 2014 Nov 7;13(11):4526-34. doi: 10.1021/pr5003593. Epub 2014 Jun 13. J Proteome Res. 2014. PMID: 24902715 Free PMC article.

2

Proteomic studies of the intrinsically unstructured mammalian proteome.

Galea CA, Pagala VR, Obenauer JC, Park CG, Slaughter CA, Kriwacki RW. Galea CA, et al. J Proteome Res. 2006 Oct;5(10):2839-48. doi: 10.1021/pr060328c. J Proteome Res. 2006. PMID: 17022655

3

Quantitative protein analysis by mass spectrometry.

Pagala VR, High AA, Wang X, Tan H, Kodali K, Mishra A, Kavdia K, Xu Y, Wu Z, Peng J. Pagala VR, et al. Methods Mol Biol. 2015;1278:281-305. doi: 10.1007/978-1-4939-2425-7_17. Methods Mol Biol. 2015. PMID: 25859956

4

Sequential Elution Interactome Analysis of the Mind Bomb 1 Ubiquitin Ligase Reveals a Novel Role in Dendritic Spine Outgrowth.

Mertz J, Tan H, Pagala V, Bai B, Chen PC, Li Y, Cho JH, Shaw T, Wang X, Peng J. Mertz J, et al. Among authors: pagala v. Mol Cell Proteomics. 2015 Jul;14(7):1898-910. doi: 10.1074/mcp.M114.045898. Epub 2015 Apr 30. Mol Cell Proteomics. 2015. PMID: 25931508 Free PMC article.

5

Efficacy of Retinoids in IKZF1-Mutated BCR-ABL1 Acute Lymphoblastic Leukemia.

Churchman ML, Low J, Qu C, Paietta EM, Kasper LH, Chang Y, Payne-Turner D, Althoff MJ, Song G, Chen SC, Ma J, Rusch M, McGoldrick D, Edmonson M, Gupta P, Wang YD, Caufield W, Freeman B, Li L, Panetta JC, Baker S, Yang YL, Roberts KG, McCastlain K, Iacobucci I, Peters JL, Centonze VE, Notta F, Dobson SM, Zandi S, Dick JE, Janke L, Peng J, Kodali K, Pagala V, Min J, Mayasundari A, Williams RT, Willman CL, Rowe J, Luger S, Dickins RA, Guy RK, Chen T, Mullighan CG. Churchman ML, et al. Among authors: pagala v. Cancer Cell. 2015 Sep 14;28(3):343-56. doi: 10.1016/j.ccell.2015.07.016. Epub 2015 Aug 27. Cancer Cell. 2015. PMID: 26321221 Free PMC article.

6

PAX7 is a required target for microRNA-206-induced differentiation of fusion-negative rhabdomyosarcoma.

Hanna JA, Garcia MR, Go JC, Finkelstein D, Kodali K, Pagala V, Wang X, Peng J, Hatley ME. Hanna JA, et al. Among authors: pagala v. Cell Death Dis. 2016 Jun 9;7(6):e2256. doi: 10.1038/cddis.2016.159. Cell Death Dis. 2016. PMID: 27277678 Free PMC article.

7

Deep Profiling of Proteome and Phosphoproteome by Isobaric Labeling, Extensive Liquid Chromatography, and Mass Spectrometry.

Bai B, Tan H, Pagala VR, High AA, Ichhaporia VP, Hendershot L, Peng J. Bai B, et al. Among authors: pagala vr. Methods Enzymol. 2017;585:377-395. doi: 10.1016/bs.mie.2016.10.007. Epub 2016 Dec 24. Methods Enzymol. 2017. PMID: 28109439 Free PMC article.

8

Extensive Peptide Fractionation and y₁ Ion-Based Interference Detection Method for Enabling Accurate Quantification by Isobaric Labeling and Mass Spectrometry.

Niu M, Cho JH, Kodali K, Pagala V, High AA, Wang H, Wu Z, Li Y, Bi W, Zhang H, Wang X, Zou W, Peng J. Niu M, et al. Among authors: pagala v. Anal Chem. 2017 Mar 7;89(5):2956-2963. doi: 10.1021/acs.analchem.6b04415. Epub 2017 Feb 22. Anal Chem. 2017. PMID: 28194965 Free PMC article.

9

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification.

High AA, Tan H, Pagala VR, Niu M, Cho JH, Wang X, Bai B, Peng J. High AA, et al. J Vis Exp. 2017 Nov 15;(129):56474. doi: 10.3791/56474. J Vis Exp. 2017. PMID: 29286450 Free PMC article.

10

Spectral Library Search Improves Assignment of TMT Labeled MS/MS Spectra.

Shen J, Pagala VR, Breuer AM, Peng J, Bin Ma, Wang X. Shen J, et al. J Proteome Res. 2018 Sep 7;17(9):3325-3331. doi: 10.1021/acs.jproteome.8b00594. Epub 2018 Aug 16. J Proteome Res. 2018. PMID: 30096983 Free PMC article.

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