Dessimoz C - Search Results

1

Big data and other challenges in the quest for orthologs.

Sonnhammer EL, Gabaldón T, Sousa da Silva AW, Martin M, Robinson-Rechavi M, Boeckmann B, Thomas PD, Dessimoz C; Quest for Orthologs consortium. Sonnhammer EL, et al. Among authors: dessimoz c. Bioinformatics. 2014 Nov 1;30(21):2993-8. doi: 10.1093/bioinformatics/btu492. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064571 Free PMC article.

2

Protein S-acylation controls the subcellular localization and biological activity of PHYTOCHROME KINASE SUBSTRATE.

Lopez Vazquez A, Allenbach Petrolati L, Legris M, Dessimoz C, Lampugnani ER, Glover N, Fankhauser C. Lopez Vazquez A, et al. Among authors: dessimoz c. Plant Cell. 2023 Jun 26;35(7):2635-2653. doi: 10.1093/plcell/koad096. Plant Cell. 2023. PMID: 36972404 Free PMC article.

3

A dimensionless fit measure for phylogenetic distance trees.

Gil M, Dessimoz C, Gonnet GH. Gil M, et al. Among authors: dessimoz c. J Bioinform Comput Biol. 2005 Dec;3(6):1429-40. doi: 10.1142/s0219720005001636. J Bioinform Comput Biol. 2005. PMID: 16374915

4

Detecting non-orthology in the COGs database and other approaches grouping orthologs using genome-specific best hits.

Dessimoz C, Boeckmann B, Roth AC, Gonnet GH. Dessimoz C, et al. Nucleic Acids Res. 2006 Jul 11;34(11):3309-16. doi: 10.1093/nar/gkl433. Print 2006. Nucleic Acids Res. 2006. PMID: 16835308 Free PMC article.

5

Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences.

Dessimoz C, Gil M, Schneider A, Gonnet GH. Dessimoz C, et al. BMC Bioinformatics. 2006 Dec 5;7:529. doi: 10.1186/1471-2105-7-529. BMC Bioinformatics. 2006. PMID: 17147817 Free PMC article.

6

OMA Browser--exploring orthologous relations across 352 complete genomes.

Schneider A, Dessimoz C, Gonnet GH. Schneider A, et al. Among authors: dessimoz c. Bioinformatics. 2007 Aug 15;23(16):2180-2. doi: 10.1093/bioinformatics/btm295. Epub 2007 Jun 1. Bioinformatics. 2007. PMID: 17545180

7

Covariance of maximum likelihood evolutionary distances between sequences aligned pairwise.

Dessimoz C, Gil M. Dessimoz C, et al. BMC Evol Biol. 2008 Jun 23;8:179. doi: 10.1186/1471-2148-8-179. BMC Evol Biol. 2008. PMID: 18573206 Free PMC article.

8

Algorithm of OMA for large-scale orthology inference.

Roth AC, Gonnet GH, Dessimoz C. Roth AC, et al. Among authors: dessimoz c. BMC Bioinformatics. 2008 Dec 4;9:518. doi: 10.1186/1471-2105-9-518. BMC Bioinformatics. 2008. PMID: 19055798 Free PMC article.

9

Phylogenetic and functional assessment of orthologs inference projects and methods.

Altenhoff AM, Dessimoz C. Altenhoff AM, et al. Among authors: dessimoz c. PLoS Comput Biol. 2009 Jan;5(1):e1000262. doi: 10.1371/journal.pcbi.1000262. Epub 2009 Jan 16. PLoS Comput Biol. 2009. PMID: 19148271 Free PMC article.

10

The Microbe browser for comparative genomics.

Gattiker A, Dessimoz C, Schneider A, Xenarios I, Pagni M, Rougemont J. Gattiker A, et al. Among authors: dessimoz c. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W296-9. doi: 10.1093/nar/gkp268. Epub 2009 Apr 30. Nucleic Acids Res. 2009. PMID: 19406928 Free PMC article.

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