Shamoo Y - Search Results

1

Structure analysis of free and bound states of an RNA aptamer against ribosomal protein S8 from Bacillus anthracis.

Davlieva M, Donarski J, Wang J, Shamoo Y, Nikonowicz EP. Davlieva M, et al. Among authors: shamoo y. Nucleic Acids Res. 2014;42(16):10795-808. doi: 10.1093/nar/gku743. Epub 2014 Aug 19. Nucleic Acids Res. 2014. PMID: 25140011 Free PMC article.

2

Enolpyruvate transferase MurAA^A149E, identified during adaptation of Enterococcus faecium to daptomycin, increases stability of MurAA-MurG interaction.

Zhou Y, Utama B, Pratap S, Supandy A, Song X, Tran TT, Mehta HH, Arias CA, Shamoo Y. Zhou Y, et al. Among authors: shamoo y. J Biol Chem. 2023 Mar;299(3):102912. doi: 10.1016/j.jbc.2023.102912. Epub 2023 Jan 14. J Biol Chem. 2023. PMID: 36649910 Free PMC article.

3

Multiple RNA binding domains (RBDs) just don't add up.

Shamoo Y, Abdul-Manan N, Williams KR. Shamoo Y, et al. Nucleic Acids Res. 1995 Mar 11;23(5):725-8. doi: 10.1093/nar/23.5.725. Nucleic Acids Res. 1995. PMID: 7535921 Free PMC article. Review.

4

Structure-based analysis of protein-RNA interactions using the program ENTANGLE.

Allers J, Shamoo Y. Allers J, et al. Among authors: shamoo y. J Mol Biol. 2001 Aug 3;311(1):75-86. doi: 10.1006/jmbi.2001.4857. J Mol Biol. 2001. PMID: 11469858

5

Protein-RNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures.

Morozova N, Allers J, Myers J, Shamoo Y. Morozova N, et al. Among authors: shamoo y. Bioinformatics. 2006 Nov 15;22(22):2746-52. doi: 10.1093/bioinformatics/btl470. Epub 2006 Sep 11. Bioinformatics. 2006. PMID: 16966360

6

Structure and biochemical characterization of an adenylate kinase originating from the psychrophilic organism Marinibacillus marinus.

Davlieva M, Shamoo Y. Davlieva M, et al. Among authors: shamoo y. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Aug 1;65(Pt 8):751-6. doi: 10.1107/S1744309109024348. Epub 2009 Jul 21. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009. PMID: 19652331 Free PMC article.

7

Crystal structure of a trimeric archaeal adenylate kinase from the mesophile Methanococcus maripaludis with an unusually broad functional range and thermal stability.

Davlieva M, Shamoo Y. Davlieva M, et al. Among authors: shamoo y. Proteins. 2010 Feb 1;78(2):357-64. doi: 10.1002/prot.22549. Proteins. 2010. PMID: 19731371

8

Evolutionary fates within a microbial population highlight an essential role for protein folding during natural selection.

Peña MI, Davlieva M, Bennett MR, Olson JS, Shamoo Y. Peña MI, et al. Among authors: shamoo y. Mol Syst Biol. 2010 Jul 13;6:387. doi: 10.1038/msb.2010.43. Mol Syst Biol. 2010. PMID: 20631681 Free PMC article.

9

Experimental evolution of adenylate kinase reveals contrasting strategies toward protein thermostability.

Miller C, Davlieva M, Wilson C, White KI, Couñago R, Wu G, Myers JC, Wittung-Stafshede P, Shamoo Y. Miller C, et al. Among authors: shamoo y. Biophys J. 2010 Aug 4;99(3):887-96. doi: 10.1016/j.bpj.2010.04.076. Biophys J. 2010. PMID: 20682267 Free PMC article.

10

Crystal structure of Bacteroides thetaiotaomicron TetX2: a tetracycline degrading monooxygenase at 2.8 Å resolution.

Walkiewicz K, Davlieva M, Wu G, Shamoo Y. Walkiewicz K, et al. Among authors: shamoo y. Proteins. 2011 Jul;79(7):2335-40. doi: 10.1002/prot.23052. Epub 2011 May 16. Proteins. 2011. PMID: 21590745 Free PMC article.

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