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DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly.
Scheinin I, Sie D, Bengtsson H, van de Wiel MA, Olshen AB, van Thuijl HF, van Essen HF, Eijk PP, Rustenburg F, Meijer GA, Reijneveld JC, Wesseling P, Pinkel D, Albertson DG, Ylstra B. Scheinin I, et al. Among authors: van essen hf, van thuijl hf, van de wiel ma. Genome Res. 2014 Dec;24(12):2022-32. doi: 10.1101/gr.175141.114. Epub 2014 Sep 18. Genome Res. 2014. PMID: 25236618 Free PMC article.
Profiling of apoptosis genes allows for clinical stratification of primary nodal diffuse large B-cell lymphomas.
Muris JJ, Ylstra B, Cillessen SA, Ossenkoppele GJ, Kluin-Nelemans JC, Eijk PP, Nota B, Tijssen M, de Boer WP, van de Wiel M, van den Ijssel PR, Jansen P, de Bruin PC, van Krieken JH, Meijer GA, Meijer CJ, Oudejans JJ. Muris JJ, et al. Br J Haematol. 2007 Jan;136(1):38-47. doi: 10.1111/j.1365-2141.2006.06375.x. Epub 2006 Oct 25. Br J Haematol. 2007. PMID: 17062006 Free article.
CGHcall: calling aberrations for array CGH tumor profiles.
van de Wiel MA, Kim KI, Vosse SJ, van Wieringen WN, Wilting SM, Ylstra B. van de Wiel MA, et al. Among authors: van wieringen wn. Bioinformatics. 2007 Apr 1;23(7):892-4. doi: 10.1093/bioinformatics/btm030. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267432
High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer.
Chin SF, Teschendorff AE, Marioni JC, Wang Y, Barbosa-Morais NL, Thorne NP, Costa JL, Pinder SE, van de Wiel MA, Green AR, Ellis IO, Porter PL, Tavaré S, Brenton JD, Ylstra B, Caldas C. Chin SF, et al. Among authors: van de wiel ma. Genome Biol. 2007;8(10):R215. doi: 10.1186/gb-2007-8-10-r215. Genome Biol. 2007. PMID: 17925008 Free PMC article.
137 results