Kaznessis YN - Search Results

1

Investigation of Changes in Tetracycline Repressor Binding upon Mutations in the Tetracycline Operator.

Bolintineanu DS, Volzing K, Vivcharuk V, Sayyed-Ahmad A, Srivastava P, Kaznessis YN. Bolintineanu DS, et al. Among authors: kaznessis yn. J Chem Eng Data. 2014 Oct 9;59(10):3167-3176. doi: 10.1021/je500225x. Epub 2014 Aug 11. J Chem Eng Data. 2014. PMID: 25308994 Free PMC article.

2

Free energy profile of the interaction between a monomer or a dimer of protegrin-1 in a specific binding orientation and a model lipid bilayer.

Vivcharuk V, Kaznessis Y. Vivcharuk V, et al. J Phys Chem B. 2010 Mar 4;114(8):2790-7. doi: 10.1021/jp909640g. J Phys Chem B. 2010. PMID: 20136112 Free PMC article.

3

Computational studies of protegrin antimicrobial peptides: a review.

Bolintineanu DS, Kaznessis YN. Bolintineanu DS, et al. Among authors: kaznessis yn. Peptides. 2011 Jan;32(1):188-201. doi: 10.1016/j.peptides.2010.10.006. Epub 2010 Oct 12. Peptides. 2011. PMID: 20946928 Free PMC article. Review.

4

Dimerization of protegrin-1 in different environments.

Vivcharuk V, Kaznessis YN. Vivcharuk V, et al. Among authors: kaznessis yn. Int J Mol Sci. 2010 Sep 9;11(9):3177-94. doi: 10.3390/ijms11093177. Int J Mol Sci. 2010. PMID: 20957087 Free PMC article.

5

Relative free energy of binding between antimicrobial peptides and SDS or DPC micelles.

Sayyed-Ahmad A, Khandelia H, Kaznessis YN. Sayyed-Ahmad A, et al. Among authors: kaznessis yn. Mol Simul. 2009 Sep;35(10-11):986-997. doi: 10.1080/08927020902902742. Mol Simul. 2009. PMID: 21113423 Free PMC article.

6

Thermodynamic analysis of protegrin-1 insertion and permeation through a lipid bilayer.

Vivcharuk V, Kaznessis YN. Vivcharuk V, et al. Among authors: kaznessis yn. J Phys Chem B. 2011 Dec 15;115(49):14704-12. doi: 10.1021/jp205153y. Epub 2011 Nov 18. J Phys Chem B. 2011. PMID: 22044268 Free PMC article.

7

Multiscale models of the antimicrobial peptide protegrin-1 on gram-negative bacteria membranes.

Bolintineanu DS, Vivcharuk V, Kaznessis YN. Bolintineanu DS, et al. Among authors: kaznessis yn. Int J Mol Sci. 2012;13(9):11000-11011. doi: 10.3390/ijms130911000. Epub 2012 Sep 5. Int J Mol Sci. 2012. PMID: 23109834 Free PMC article. Review.

8

Poisson-Nernst-Planck models of nonequilibrium ion electrodiffusion through a protegrin transmembrane pore.

Bolintineanu DS, Sayyed-Ahmad A, Davis HT, Kaznessis YN. Bolintineanu DS, et al. Among authors: kaznessis yn. PLoS Comput Biol. 2009 Jan;5(1):e1000277. doi: 10.1371/journal.pcbi.1000277. Epub 2009 Jan 30. PLoS Comput Biol. 2009. PMID: 19180178 Free PMC article.

9

Determining the orientation of protegrin-1 in DLPC bilayers using an implicit solvent-membrane model.

Sayyed-Ahmad A, Kaznessis YN. Sayyed-Ahmad A, et al. Among authors: kaznessis yn. PLoS One. 2009;4(3):e4799. doi: 10.1371/journal.pone.0004799. Epub 2009 Mar 11. PLoS One. 2009. PMID: 19277199 Free PMC article.

10

proTeOn and proTeOff, new protein devices that inducibly activate bacterial gene expression.

Volzing K, Biliouris K, Kaznessis YN. Volzing K, et al. Among authors: kaznessis yn. ACS Chem Biol. 2011 Oct 21;6(10):1107-16. doi: 10.1021/cb200168y. Epub 2011 Aug 18. ACS Chem Biol. 2011. PMID: 21819083 Free PMC article.

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