Geeven G - Search Results

1

Large-scale identification of coregulated enhancer networks in the adult human brain.

Vermunt MW, Reinink P, Korving J, de Bruijn E, Creyghton PM, Basak O, Geeven G, Toonen PW, Lansu N, Meunier C, van Heesch S; Netherlands Brain Bank; Clevers H, de Laat W, Cuppen E, Creyghton MP. Vermunt MW, et al. Among authors: geeven g. Cell Rep. 2014 Oct 23;9(2):767-79. doi: 10.1016/j.celrep.2014.09.023. Epub 2014 Oct 16. Cell Rep. 2014. PMID: 25373911 Free article.

2

Epigenomic annotation of gene regulatory alterations during evolution of the primate brain.

Vermunt MW, Tan SC, Castelijns B, Geeven G, Reinink P, de Bruijn E, Kondova I, Persengiev S; Netherlands Brain Bank; Bontrop R, Cuppen E, de Laat W, Creyghton MP. Vermunt MW, et al. Among authors: geeven g. Nat Neurosci. 2016 Mar;19(3):494-503. doi: 10.1038/nn.4229. Epub 2016 Jan 25. Nat Neurosci. 2016. PMID: 26807951

3

Recently Evolved Enhancers Emerge with High Interindividual Variability and Less Frequently Associate with Disease.

Castelijns B, Baak ML, Geeven G, Vermunt MW, Wiggers CRM, Timpanaro IS, Kondova I, de Laat W, Creyghton MP. Castelijns B, et al. Among authors: geeven g. Cell Rep. 2020 Jun 23;31(12):107799. doi: 10.1016/j.celrep.2020.107799. Cell Rep. 2020. PMID: 32579926 Free article.

4

Local compartment changes and regulatory landscape alterations in histone H1-depleted cells.

Geeven G, Zhu Y, Kim BJ, Bartholdy BA, Yang SM, Macfarlan TS, Gifford WD, Pfaff SL, Verstegen MJ, Pinto H, Vermunt MW, Creyghton MP, Wijchers PJ, Stamatoyannopoulos JA, Skoultchi AI, de Laat W. Geeven G, et al. Genome Biol. 2015 Dec 23;16:289. doi: 10.1186/s13059-015-0857-0. Genome Biol. 2015. PMID: 26700097 Free PMC article.

5

Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients.

Castelijns B, Baak ML, Timpanaro IS, Wiggers CRM, Vermunt MW, Shang P, Kondova I, Geeven G, Bianchi V, de Laat W, Geijsen N, Creyghton MP. Castelijns B, et al. Among authors: geeven g. Nat Commun. 2020 Jan 16;11(1):301. doi: 10.1038/s41467-019-14269-w. Nat Commun. 2020. PMID: 31949148 Free PMC article.

6

YAP Drives Growth by Controlling Transcriptional Pause Release from Dynamic Enhancers.

Galli GG, Carrara M, Yuan WC, Valdes-Quezada C, Gurung B, Pepe-Mooney B, Zhang T, Geeven G, Gray NS, de Laat W, Calogero RA, Camargo FD. Galli GG, et al. Among authors: geeven g. Mol Cell. 2015 Oct 15;60(2):328-37. doi: 10.1016/j.molcel.2015.09.001. Epub 2015 Oct 1. Mol Cell. 2015. PMID: 26439301 Free PMC article.

7

Chromatin Conformation Links Putative Enhancers in Intracranial Aneurysm-Associated Regions to Potential Candidate Genes.

Laarman MD, Geeven G, Barnett P; Netherlands Brain Bank; Rinkel GJE, de Laat W, Ruigrok YM, Bakkers J. Laarman MD, et al. Among authors: geeven g. J Am Heart Assoc. 2019 May 7;8(9):e011201. doi: 10.1161/JAHA.118.011201. J Am Heart Assoc. 2019. PMID: 30994044 Free PMC article.

8

Epigenetic Analyses of Human Left Atrial Tissue Identifies Gene Networks Underlying Atrial Fibrillation.

Hall AW, Chaffin M, Roselli C, Lin H, Lubitz SA, Bianchi V, Geeven G, Bedi K, Margulies KB, de Laat W, Tucker NR, Ellinor PT. Hall AW, et al. Among authors: geeven g. Circ Genom Precis Med. 2020 Dec;13(6):e003085. doi: 10.1161/CIRCGEN.120.003085. Epub 2020 Nov 6. Circ Genom Precis Med. 2020. PMID: 33155827 Free PMC article.

9

Enhancers reside in a unique epigenetic environment during early zebrafish development.

Kaaij LJ, Mokry M, Zhou M, Musheev M, Geeven G, Melquiond AS, de Jesus Domingues AM, de Laat W, Niehrs C, Smith AD, Ketting RF. Kaaij LJ, et al. Among authors: geeven g. Genome Biol. 2016 Jul 5;17(1):146. doi: 10.1186/s13059-016-1013-1. Genome Biol. 2016. PMID: 27381023 Free PMC article.

10

Genome-wide profiling of p53-regulated enhancer RNAs uncovers a subset of enhancers controlled by a lncRNA.

Léveillé N, Melo CA, Rooijers K, Díaz-Lagares A, Melo SA, Korkmaz G, Lopes R, Moqadam FA, Maia AR, Wijchers PJ, Geeven G, den Boer ML, Kalluri R, de Laat W, Esteller M, Agami R. Léveillé N, et al. Among authors: geeven g. Nat Commun. 2015 Mar 27;6:6520. doi: 10.1038/ncomms7520. Nat Commun. 2015. PMID: 25813522 Free PMC article.

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