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Structure and dynamics of oligonucleotides in the gas phase.
Arcella A, Dreyer J, Ippoliti E, Ivani I, Portella G, Gabelica V, Carloni P, Orozco M. Arcella A, et al. Among authors: portella g. Angew Chem Int Ed Engl. 2015 Jan 7;54(2):467-71. doi: 10.1002/anie.201406910. Epub 2014 Nov 21. Angew Chem Int Ed Engl. 2015. PMID: 25417598
Structure of triplex DNA in the gas phase.
Arcella A, Portella G, Ruiz ML, Eritja R, Vilaseca M, Gabelica V, Orozco M. Arcella A, et al. Among authors: portella g. J Am Chem Soc. 2012 Apr 18;134(15):6596-606. doi: 10.1021/ja209786t. Epub 2012 Apr 6. J Am Chem Soc. 2012. PMID: 22420643 Free article.
Structure and properties of DNA in apolar solvents.
Arcella A, Portella G, Collepardo-Guevara R, Chakraborty D, Wales DJ, Orozco M. Arcella A, et al. Among authors: portella g. J Phys Chem B. 2014 Jul 24;118(29):8540-8. doi: 10.1021/jp503816r. Epub 2014 Jul 14. J Phys Chem B. 2014. PMID: 24968001 Free PMC article.
Backbone FC-H···O hydrogen bonds in 2'F-substituted nucleic acids.
Martin-Pintado N, Deleavey GF, Portella G, Campos-Olivas R, Orozco M, Damha MJ, González C. Martin-Pintado N, et al. Among authors: portella g. Angew Chem Int Ed Engl. 2013 Nov 11;52(46):12065-8. doi: 10.1002/anie.201305710. Epub 2013 Sep 23. Angew Chem Int Ed Engl. 2013. PMID: 24115468 No abstract available.
How accurate are accurate force-fields for B-DNA?
Dans PD, Ivani I, Hospital A, Portella G, González C, Orozco M. Dans PD, et al. Among authors: portella g. Nucleic Acids Res. 2017 Apr 20;45(7):4217-4230. doi: 10.1093/nar/gkw1355. Nucleic Acids Res. 2017. PMID: 28088759 Free PMC article.
Parmbsc1: a refined force field for DNA simulations.
Ivani I, Dans PD, Noy A, Pérez A, Faustino I, Hospital A, Walther J, Andrio P, Goñi R, Balaceanu A, Portella G, Battistini F, Gelpí JL, González C, Vendruscolo M, Laughton CA, Harris SA, Case DA, Orozco M. Ivani I, et al. Among authors: portella g. Nat Methods. 2016 Jan;13(1):55-8. doi: 10.1038/nmeth.3658. Epub 2015 Nov 16. Nat Methods. 2016. PMID: 26569599 Free PMC article.
207 results