Srikumar T - Search Results

1

Identification of c-MYC SUMOylation by mass spectrometry.

Kalkat M, Chan PK, Wasylishen AR, Srikumar T, Kim SS, Ponzielli R, Bazett-Jones DP, Raught B, Penn LZ. Kalkat M, et al. Among authors: srikumar t. PLoS One. 2014 Dec 18;9(12):e115337. doi: 10.1371/journal.pone.0115337. eCollection 2014. PLoS One. 2014. PMID: 25522242 Free PMC article.

2

BioID identifies novel c-MYC interacting partners in cultured cells and xenograft tumors.

Dingar D, Kalkat M, Chan PK, Srikumar T, Bailey SD, Tu WB, Coyaud E, Ponzielli R, Kolyar M, Jurisica I, Huang A, Lupien M, Penn LZ, Raught B. Dingar D, et al. Among authors: srikumar t. J Proteomics. 2015 Apr 6;118:95-111. doi: 10.1016/j.jprot.2014.09.029. Epub 2014 Oct 18. J Proteomics. 2015. PMID: 25452129

3

Using mass spectrometry to identify ubiquitin and ubiquitin-like protein conjugation sites.

Jeram SM, Srikumar T, Pedrioli PG, Raught B. Jeram SM, et al. Among authors: srikumar t. Proteomics. 2009 Feb;9(4):922-34. doi: 10.1002/pmic.200800666. Proteomics. 2009. PMID: 19180541 Review.

4

The use of ubiquitin lysine mutants to characterize E2-E3 linkage specificity: Mass spectrometry offers a cautionary "tail".

Hong JH, Ng D, Srikumar T, Raught B. Hong JH, et al. Among authors: srikumar t. Proteomics. 2015 Sep;15(17):2910-5. doi: 10.1002/pmic.201500058. Epub 2015 Jul 2. Proteomics. 2015. PMID: 26036340

5

BioID data of c-MYC interacting protein partners in cultured cells and xenograft tumors.

Chan PK, Srikumar T, Dingar D, Kalkat M, Penn LZ, Raught B. Chan PK, et al. Among authors: srikumar t. Data Brief. 2014 Oct 14;1:76-8. doi: 10.1016/j.dib.2014.10.001. eCollection 2014 Dec. Data Brief. 2014. PMID: 26217692 Free PMC article.

6

Raw data for the identification of SUMOylated proteins in S. cerevisiae subjected to two types of osmotic shock, using affinity purification coupled with mass spectrometry.

Srikumar T, Lewicki MC, Raught B. Srikumar T, et al. Data Brief. 2014 Nov 27;2:29-31. doi: 10.1016/j.dib.2014.11.003. eCollection 2015 Mar. Data Brief. 2014. PMID: 26217701 Free PMC article.

7

A global S. cerevisiae small ubiquitin-related modifier (SUMO) system interactome.

Srikumar T, Lewicki MC, Raught B. Srikumar T, et al. Mol Syst Biol. 2013 May 28;9:668. doi: 10.1038/msb.2013.23. Mol Syst Biol. 2013. PMID: 23712011 Free PMC article.

8

The S. cerevisiae SUMO stress response is a conjugation-deconjugation cycle that targets the transcription machinery.

Lewicki MC, Srikumar T, Johnson E, Raught B. Lewicki MC, et al. Among authors: srikumar t. J Proteomics. 2015 Apr 6;118:39-48. doi: 10.1016/j.jprot.2014.11.012. Epub 2014 Nov 27. J Proteomics. 2015. PMID: 25434491

9

KCMF1 (potassium channel modulatory factor 1) Links RAD6 to UBR4 (ubiquitin N-recognin domain-containing E3 ligase 4) and lysosome-mediated degradation.

Hong JH, Kaustov L, Coyaud E, Srikumar T, Wan J, Arrowsmith C, Raught B. Hong JH, et al. Among authors: srikumar t. Mol Cell Proteomics. 2015 Mar;14(3):674-85. doi: 10.1074/mcp.M114.042168. Epub 2015 Jan 12. Mol Cell Proteomics. 2015. PMID: 25582440 Free PMC article.

10

Using ProHits to store, annotate, and analyze affinity purification-mass spectrometry (AP-MS) data.

Liu G, Zhang J, Choi H, Lambert JP, Srikumar T, Larsen B, Nesvizhskii AI, Raught B, Tyers M, Gingras AC. Liu G, et al. Among authors: srikumar t. Curr Protoc Bioinformatics. 2012 Sep;Chapter 8:8.16.1-8.16.32. doi: 10.1002/0471250953.bi0816s39. Curr Protoc Bioinformatics. 2012. PMID: 22948730 Free PMC article.

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