Donald BR - Search Results

1

Protein design algorithms predict viable resistance to an experimental antifolate.

Reeve SM, Gainza P, Frey KM, Georgiev I, Donald BR, Anderson AC. Reeve SM, et al. Among authors: donald br. Proc Natl Acad Sci U S A. 2015 Jan 20;112(3):749-54. doi: 10.1073/pnas.1411548112. Epub 2014 Dec 31. Proc Natl Acad Sci U S A. 2015. PMID: 25552560 Free PMC article.

2

DexDesign: A new OSPREY-based algorithm for designing de novo D-peptide inhibitors.

Guerin N, Childs H, Zhou P, Donald BR. Guerin N, et al. Among authors: donald br. bioRxiv [Preprint]. 2024 Feb 14:2024.02.12.579944. doi: 10.1101/2024.02.12.579944. bioRxiv. 2024. Update in: Protein Eng Des Sel. 2024 Jan 29;37:gzae007. doi: 10.1093/protein/gzae007 PMID: 38405797 Free PMC article. Updated. Preprint.

3

Phylogenetic classification of protozoa based on the structure of the linker domain in the bifunctional enzyme, dihydrofolate reductase-thymidylate synthase.

O'Neil RH, Lilien RH, Donald BR, Stroud RM, Anderson AC. O'Neil RH, et al. Among authors: donald br. J Biol Chem. 2003 Dec 26;278(52):52980-7. doi: 10.1074/jbc.M310328200. Epub 2003 Oct 9. J Biol Chem. 2003. PMID: 14555647 Free article.

4

The crystal structure of dihydrofolate reductase-thymidylate synthase from Cryptosporidium hominis reveals a novel architecture for the bifunctional enzyme.

O'Neil RH, Lilien RH, Donald BR, Stroud RM, Anderson AC. O'Neil RH, et al. Among authors: donald br. J Eukaryot Microbiol. 2003;50 Suppl:555-6. doi: 10.1111/j.1550-7408.2003.tb00627.x. J Eukaryot Microbiol. 2003. PMID: 14736160 No abstract available.

5

A subgroup algorithm to identify cross-rotation peaks consistent with non-crystallographic symmetry.

Lilien RH, Bailey-Kellogg C, Anderson AC, Donald BR. Lilien RH, et al. Among authors: donald br. Acta Crystallogr D Biol Crystallogr. 2004 Jun;60(Pt 6):1057-67. doi: 10.1107/S090744490400695X. Epub 2004 May 21. Acta Crystallogr D Biol Crystallogr. 2004. PMID: 15159565

6

A novel ensemble-based scoring and search algorithm for protein redesign and its application to modify the substrate specificity of the gramicidin synthetase a phenylalanine adenylation enzyme.

Lilien RH, Stevens BW, Anderson AC, Donald BR. Lilien RH, et al. Among authors: donald br. J Comput Biol. 2005 Jul-Aug;12(6):740-61. doi: 10.1089/cmb.2005.12.740. J Comput Biol. 2005. PMID: 16108714

7

Improved Pruning algorithms and Divide-and-Conquer strategies for Dead-End Elimination, with application to protein design.

Georgiev I, Lilien RH, Donald BR. Georgiev I, et al. Among authors: donald br. Bioinformatics. 2006 Jul 15;22(14):e174-83. doi: 10.1093/bioinformatics/btl220. Bioinformatics. 2006. PMID: 16873469

8

Redesigning the PheA domain of gramicidin synthetase leads to a new understanding of the enzyme's mechanism and selectivity.

Stevens BW, Lilien RH, Georgiev I, Donald BR, Anderson AC. Stevens BW, et al. Among authors: donald br. Biochemistry. 2006 Dec 26;45(51):15495-504. doi: 10.1021/bi061788m. Epub 2006 Dec 19. Biochemistry. 2006. PMID: 17176071

9

Dead-end elimination with backbone flexibility.

Georgiev I, Donald BR. Georgiev I, et al. Among authors: donald br. Bioinformatics. 2007 Jul 1;23(13):i185-94. doi: 10.1093/bioinformatics/btm197. Bioinformatics. 2007. PMID: 17646295

10

The minimized dead-end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles.

Georgiev I, Lilien RH, Donald BR. Georgiev I, et al. Among authors: donald br. J Comput Chem. 2008 Jul 30;29(10):1527-42. doi: 10.1002/jcc.20909. J Comput Chem. 2008. PMID: 18293294 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

92 results

Search Page

Filters