Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

9 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Publication Date timeline is not available.
Page 1
Halvade: scalable sequence analysis with MapReduce.
Decap D, Reumers J, Herzeel C, Costanza P, Fostier J. Decap D, et al. Bioinformatics. 2015 Aug 1;31(15):2482-8. doi: 10.1093/bioinformatics/btv179. Epub 2015 Mar 26. Bioinformatics. 2015. PMID: 25819078 Free PMC article.
BLSSpeller: exhaustive comparative discovery of conserved cis-regulatory elements.
De Witte D, Van de Velde J, Decap D, Van Bel M, Audenaert P, Demeester P, Dhoedt B, Vandepoele K, Fostier J. De Witte D, et al. Among authors: decap d. Bioinformatics. 2015 Dec 1;31(23):3758-66. doi: 10.1093/bioinformatics/btv466. Epub 2015 Aug 8. Bioinformatics. 2015. PMID: 26254488 Free PMC article.
elPrep 4: A multithreaded framework for sequence analysis.
Herzeel C, Costanza P, Decap D, Fostier J, Verachtert W. Herzeel C, et al. Among authors: decap d. PLoS One. 2019 Feb 13;14(2):e0209523. doi: 10.1371/journal.pone.0209523. eCollection 2019. PLoS One. 2019. PMID: 30759172 Free PMC article.
Multithreaded variant calling in elPrep 5.
Herzeel C, Costanza P, Decap D, Fostier J, Wuyts R, Verachtert W. Herzeel C, et al. Among authors: decap d. PLoS One. 2021 Feb 4;16(2):e0244471. doi: 10.1371/journal.pone.0244471. eCollection 2021. PLoS One. 2021. PMID: 33539352 Free PMC article.
Halvade somatic: Somatic variant calling with Apache Spark.
Decap D, de Schaetzen van Brienen L, Larmuseau M, Costanza P, Herzeel C, Wuyts R, Marchal K, Fostier J. Decap D, et al. Gigascience. 2022 Jan 12;11(1):giab094. doi: 10.1093/gigascience/giab094. Gigascience. 2022. PMID: 35022699 Free PMC article.
BLSSpeller to discover novel regulatory motifs in maize.
Rahmani RS, Decap D, Fostier J, Marchal K. Rahmani RS, et al. Among authors: decap d. DNA Res. 2022 Jun 25;29(4):dsac029. doi: 10.1093/dnares/dsac029. DNA Res. 2022. PMID: 35904558 Free PMC article.