Benelli M - Search Results

1

A Systematic Assessment of Accuracy in Detecting Somatic Mosaic Variants by Deep Amplicon Sequencing: Application to NF2 Gene.

Contini E, Paganini I, Sestini R, Candita L, Capone GL, Barbetti L, Falconi S, Frusconi S, Giotti I, Giuliani C, Torricelli F, Benelli M, Papi L. Contini E, et al. Among authors: benelli m. PLoS One. 2015 Jun 12;10(6):e0129099. doi: 10.1371/journal.pone.0129099. eCollection 2015. PLoS One. 2015. PMID: 26066488 Free PMC article.

2

Noninvasive Detection of Neuroendocrine Prostate Cancer through Targeted Cell-free DNA Methylation.

Franceschini GM, Quaini O, Mizuno K, Orlando F, Ciani Y, Ku SY, Sigouros M, Rothmann E, Alonso A, Benelli M, Nardella C, Auh J, Freeman D, Hanratty B, Adil M, Elemento O, Tagawa ST, Feng FY, Caffo O, Buttigliero C, Basso U, Nelson PS, Corey E, Haffner MC, Attard G, Aparicio A, Demichelis F, Beltran H. Franceschini GM, et al. Among authors: benelli m. Cancer Discov. 2024 Mar 1;14(3):424-445. doi: 10.1158/2159-8290.CD-23-0754. Cancer Discov. 2024. PMID: 38197680 Free PMC article.

3

CHD8 suppression impacts on histone H3 lysine 36 trimethylation and alters RNA alternative splicing.

Kerschbamer E, Arnoldi M, Tripathi T, Pellegrini M, Maturi S, Erdin S, Salviato E, Di Leva F, Sebestyén E, Dassi E, Zarantonello G, Benelli M, Campos E, Basson MA, Gusella JF, Gustincich S, Piazza S, Demichelis F, Talkowski ME, Ferrari F, Biagioli M. Kerschbamer E, et al. Among authors: benelli m. Nucleic Acids Res. 2022 Dec 9;50(22):12809-12828. doi: 10.1093/nar/gkac1134. Nucleic Acids Res. 2022. PMID: 36537238 Free PMC article.

4

MIMESIS: minimal DNA-methylation signatures to quantify and classify tumor signals in tissue and cell-free DNA samples.

Romagnoli D, Nardone A, Galardi F, Paoli M, De Luca F, Biagioni C, Franceschini GM, Pestrin M, Sanna G, Moretti E, Demichelis F, Migliaccio I, Biganzoli L, Malorni L, Benelli M. Romagnoli D, et al. Among authors: benelli m. Brief Bioinform. 2023 Mar 19;24(2):bbad015. doi: 10.1093/bib/bbad015. Brief Bioinform. 2023. PMID: 36653909

5

A shifting level model algorithm that identifies aberrations in array-CGH data.

Magi A, Benelli M, Marseglia G, Nannetti G, Scordo MR, Torricelli F. Magi A, et al. Among authors: benelli m. Biostatistics. 2010 Apr;11(2):265-80. doi: 10.1093/biostatistics/kxp051. Epub 2009 Nov 30. Biostatistics. 2010. PMID: 19948744

6

A very fast and accurate method for calling aberrations in array-CGH data.

Benelli M, Marseglia G, Nannetti G, Paravidino R, Zara F, Bricarelli FD, Torricelli F, Magi A. Benelli M, et al. Biostatistics. 2010 Jul;11(3):515-8. doi: 10.1093/biostatistics/kxq008. Epub 2010 Mar 5. Biostatistics. 2010. PMID: 20207682

7

Detecting common copy number variants in high-throughput sequencing data by using JointSLM algorithm.

Magi A, Benelli M, Yoon S, Roviello F, Torricelli F. Magi A, et al. Among authors: benelli m. Nucleic Acids Res. 2011 May;39(10):e65. doi: 10.1093/nar/gkr068. Epub 2011 Feb 14. Nucleic Acids Res. 2011. PMID: 21321017 Free PMC article.

8

EX-HOM (EXome HOMozygosity): a proof of principle.

Pippucci T, Benelli M, Magi A, Martelli PL, Magini P, Torricelli F, Casadio R, Seri M, Romeo G. Pippucci T, et al. Among authors: benelli m. Hum Hered. 2011;72(1):45-53. doi: 10.1159/000330164. Epub 2011 Aug 18. Hum Hered. 2011. PMID: 21849793

9

Read count approach for DNA copy number variants detection.

Magi A, Tattini L, Pippucci T, Torricelli F, Benelli M. Magi A, et al. Among authors: benelli m. Bioinformatics. 2012 Feb 15;28(4):470-8. doi: 10.1093/bioinformatics/btr707. Epub 2011 Dec 23. Bioinformatics. 2012. PMID: 22199393

10

372 kb microdeletion in 18q12.3 causing SETBP1 haploinsufficiency associated with mild mental retardation and expressive speech impairment.

Marseglia G, Scordo MR, Pescucci C, Nannetti G, Biagini E, Scandurra V, Gerundino F, Magi A, Benelli M, Torricelli F. Marseglia G, et al. Among authors: benelli m. Eur J Med Genet. 2012 Mar;55(3):216-21. doi: 10.1016/j.ejmg.2012.01.005. Epub 2012 Jan 25. Eur J Med Genet. 2012. PMID: 22333924

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