Linnarsson S - Search Results

1

Gene expression analysis of skin grafts and cultured keratinocytes using synthetic RNA normalization reveals insights into differentiation and growth control.

Katayama S, Skoog T, Jouhilahti EM, Siitonen HA, Nuutila K, Tervaniemi MH, Vuola J, Johnsson A, Lönnerberg P, Linnarsson S, Elomaa O, Kankuri E, Kere J. Katayama S, et al. Among authors: linnarsson s. BMC Genomics. 2015 Jun 25;16(1):476. doi: 10.1186/s12864-015-1671-5. BMC Genomics. 2015. PMID: 26108968 Free PMC article.

2

Transcriptional maintenance of cortical somatostatin interneuron subtype identity during migration.

Munguba H, Nikouei K, Hochgerner H, Oberst P, Kouznetsova A, Ryge J, Muñoz-Manchado AB, Close J, Batista-Brito R, Linnarsson S, Hjerling-Leffler J. Munguba H, et al. Among authors: linnarsson s. Neuron. 2023 Nov 15;111(22):3590-3603.e5. doi: 10.1016/j.neuron.2023.07.018. Epub 2023 Aug 24. Neuron. 2023. PMID: 37625400 Free article.

3

Whole-genome expression profiling through fragment display and combinatorial gene identification.

Metsis A, Andersson U, Baurén G, Ernfors P, Lönnerberg P, Montelius A, Oldin M, Pihlak A, Linnarsson S. Metsis A, et al. Among authors: linnarsson s. Nucleic Acids Res. 2004 Sep 8;32(16):e127. doi: 10.1093/nar/gnh126. Nucleic Acids Res. 2004. PMID: 15356287 Free PMC article.

4

Rapid genome sequencing with short universal tiling probes.

Pihlak A, Baurén G, Hersoug E, Lönnerberg P, Metsis A, Linnarsson S. Pihlak A, et al. Among authors: linnarsson s. Nat Biotechnol. 2008 Jun;26(6):676-84. doi: 10.1038/nbt1405. Epub 2008 May 25. Nat Biotechnol. 2008. PMID: 18500336

5

Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq.

Islam S, Kjällquist U, Moliner A, Zajac P, Fan JB, Lönnerberg P, Linnarsson S. Islam S, et al. Among authors: linnarsson s. Genome Res. 2011 Jul;21(7):1160-7. doi: 10.1101/gr.110882.110. Epub 2011 May 4. Genome Res. 2011. PMID: 21543516 Free PMC article.

6

Highly multiplexed and strand-specific single-cell RNA 5' end sequencing.

Islam S, Kjällquist U, Moliner A, Zajac P, Fan JB, Lönnerberg P, Linnarsson S. Islam S, et al. Among authors: linnarsson s. Nat Protoc. 2012 Apr 5;7(5):813-28. doi: 10.1038/nprot.2012.022. Nat Protoc. 2012. PMID: 22481528

7

High-resolution analysis with novel cell-surface markers identifies routes to iPS cells.

O'Malley J, Skylaki S, Iwabuchi KA, Chantzoura E, Ruetz T, Johnsson A, Tomlinson SR, Linnarsson S, Kaji K. O'Malley J, et al. Among authors: linnarsson s. Nature. 2013 Jul 4;499(7456):88-91. doi: 10.1038/nature12243. Epub 2013 Jun 2. Nature. 2013. PMID: 23728301 Free PMC article.

8

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization.

Katayama S, Töhönen V, Linnarsson S, Kere J. Katayama S, et al. Among authors: linnarsson s. Bioinformatics. 2013 Nov 15;29(22):2943-5. doi: 10.1093/bioinformatics/btt511. Epub 2013 Aug 31. Bioinformatics. 2013. PMID: 23995393 Free PMC article.

9

Quantitative single-cell RNA-seq with unique molecular identifiers.

Islam S, Zeisel A, Joost S, La Manno G, Zajac P, Kasper M, Lönnerberg P, Linnarsson S. Islam S, et al. Among authors: linnarsson s. Nat Methods. 2014 Feb;11(2):163-6. doi: 10.1038/nmeth.2772. Epub 2013 Dec 22. Nat Methods. 2014. PMID: 24363023

10

Base preferences in non-templated nucleotide incorporation by MMLV-derived reverse transcriptases.

Zajac P, Islam S, Hochgerner H, Lönnerberg P, Linnarsson S. Zajac P, et al. Among authors: linnarsson s. PLoS One. 2013 Dec 31;8(12):e85270. doi: 10.1371/journal.pone.0085270. eCollection 2013. PLoS One. 2013. PMID: 24392002 Free PMC article.

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