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CETCh-seq: CRISPR epitope tagging ChIP-seq of DNA-binding proteins.
Savic D, Partridge EC, Newberry KM, Smith SB, Meadows SK, Roberts BS, Mackiewicz M, Mendenhall EM, Myers RM. Savic D, et al. Among authors: meadows sk. Genome Res. 2015 Oct;25(10):1581-9. doi: 10.1101/gr.193540.115. Epub 2015 Sep 9. Genome Res. 2015. PMID: 26355004 Free PMC article.
Intricate interplay between astrocytes and motor neurons in ALS.
Phatnani HP, Guarnieri P, Friedman BA, Carrasco MA, Muratet M, O'Keeffe S, Nwakeze C, Pauli-Behn F, Newberry KM, Meadows SK, Tapia JC, Myers RM, Maniatis T. Phatnani HP, et al. Among authors: meadows sk. Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):E756-65. doi: 10.1073/pnas.1222361110. Epub 2013 Feb 6. Proc Natl Acad Sci U S A. 2013. PMID: 23388633 Free PMC article.
DDX5 and its associated lncRNA Rmrp modulate TH17 cell effector functions.
Huang W, Thomas B, Flynn RA, Gavzy SJ, Wu L, Kim SV, Hall JA, Miraldi ER, Ng CP, Rigo F, Meadows S, Montoya NR, Herrera NG, Domingos AI, Rastinejad F, Myers RM, Fuller-Pace FV, Bonneau R, Chang HY, Acuto O, Littman DR. Huang W, et al. Nature. 2015 Dec 24;528(7583):517-22. doi: 10.1038/nature16193. Epub 2015 Dec 16. Nature. 2015. Retraction in: Nature. 2018 Oct;562(7725):150. doi: 10.1038/s41586-018-0311-z PMID: 26675721 Free PMC article. Retracted.
Retraction Note: DDX5 and its associated lncRNA Rmrp modulate TH17 cell effector functions.
Huang W, Thomas B, Flynn RA, Gavzy SJ, Wu L, Kim SV, Hall JA, Miraldi ER, Ng CP, Rigo F, Meadows S, Montoya NR, Herrera NG, Domingos AI, Rastinejad F, Myers RM, Fuller-Pace FV, Bonneau R, Chang HY, Acuto O, Littman DR. Huang W, et al. Nature. 2018 Oct;562(7725):150. doi: 10.1038/s41586-018-0311-z. Nature. 2018. PMID: 29973715 Free PMC article.
HDAC2 Regulates Site-Specific Acetylation of MDM2 and Its Ubiquitination Signaling in Tumor Suppression.
Patel N, Wang J, Shiozawa K, Jones KB, Zhang Y, Prokop JW, Davenport GG, Nihira NT, Hao Z, Wong D, Brandsmeier L, Meadows SK, Sampaio AV, Werff RV, Endo M, Capecchi MR, McNagny KM, Mak TW, Nielsen TO, Underhill TM, Myers RM, Kondo T, Su L. Patel N, et al. Among authors: meadows sk. iScience. 2019 Mar 29;13:43-54. doi: 10.1016/j.isci.2019.02.008. Epub 2019 Feb 15. iScience. 2019. PMID: 30818224 Free PMC article.
Dynamics of microRNA expression during mouse prenatal development.
Rahmanian S, Murad R, Breschi A, Zeng W, Mackiewicz M, Williams B, Davis CA, Roberts B, Meadows S, Moore D, Trout D, Zaleski C, Dobin A, Sei LH, Drenkow J, Scavelli A, Gingeras TR, Wold BJ, Myers RM, Guigó R, Mortazavi A. Rahmanian S, et al. Genome Res. 2019 Nov;29(11):1900-1909. doi: 10.1101/gr.248997.119. Epub 2019 Oct 23. Genome Res. 2019. PMID: 31645363 Free PMC article.
Epitope Tagging ChIP-Seq of DNA Binding Proteins Using CETCh-Seq.
Meadows SK, Brandsmeier LA, Newberry KM, Betti MJ, Nesmith AS, Mackiewicz M, Partridge EC, Mendenhall EM, Myers RM. Meadows SK, et al. Methods Mol Biol. 2020;2117:3-34. doi: 10.1007/978-1-0716-0301-7_1. Methods Mol Biol. 2020. PMID: 31960370
Occupancy maps of 208 chromatin-associated proteins in one human cell type.
Partridge EC, Chhetri SB, Prokop JW, Ramaker RC, Jansen CS, Goh ST, Mackiewicz M, Newberry KM, Brandsmeier LA, Meadows SK, Messer CL, Hardigan AA, Coppola CJ, Dean EC, Jiang S, Savic D, Mortazavi A, Wold BJ, Myers RM, Mendenhall EM. Partridge EC, et al. Among authors: meadows sk. Nature. 2020 Jul;583(7818):720-728. doi: 10.1038/s41586-020-2023-4. Epub 2020 Jul 29. Nature. 2020. PMID: 32728244 Free PMC article.
41 results