Shi H - Search Results

1

Predicting DNA Methylation State of CpG Dinucleotide Using Genome Topological Features and Deep Networks.

Wang Y, Liu T, Xu D, Shi H, Zhang C, Mo YY, Wang Z. Wang Y, et al. Among authors: shi h. Sci Rep. 2016 Jan 22;6:19598. doi: 10.1038/srep19598. Sci Rep. 2016. PMID: 26797014 Free PMC article.

2

Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing.

Taylor KH, Kramer RS, Davis JW, Guo J, Duff DJ, Xu D, Caldwell CW, Shi H. Taylor KH, et al. Among authors: shi h. Cancer Res. 2007 Sep 15;67(18):8511-8. doi: 10.1158/0008-5472.CAN-07-1016. Cancer Res. 2007. PMID: 17875690 Free article.

3

PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.

Srivastava GP, Guo J, Shi H, Xu D. Srivastava GP, et al. Among authors: shi h. Bioinformatics. 2008 Sep 1;24(17):1837-42. doi: 10.1093/bioinformatics/btn320. Epub 2008 Jun 25. Bioinformatics. 2008. PMID: 18579568

4

Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing.

Choi JH, Li Y, Guo J, Pei L, Rauch TA, Kramer RS, Macmil SL, Wiley GB, Bennett LB, Schnabel JL, Taylor KH, Kim S, Xu D, Sreekumar A, Pfeifer GP, Roe BA, Caldwell CW, Bhalla KN, Shi H. Choi JH, et al. Among authors: shi h. PLoS One. 2010 Sep 29;5(9):e13020. doi: 10.1371/journal.pone.0013020. PLoS One. 2010. PMID: 20927367 Free PMC article.

5

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing.

Lee EJ, Pei L, Srivastava G, Joshi T, Kushwaha G, Choi JH, Robertson KD, Wang X, Colbourne JK, Zhang L, Schroth GP, Xu D, Zhang K, Shi H. Lee EJ, et al. Among authors: shi h. Nucleic Acids Res. 2011 Oct;39(19):e127. doi: 10.1093/nar/gkr598. Epub 2011 Jul 23. Nucleic Acids Res. 2011. PMID: 21785137 Free PMC article.

6

Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia.

Pei L, Choi JH, Liu J, Lee EJ, McCarthy B, Wilson JM, Speir E, Awan F, Tae H, Arthur G, Schnabel JL, Taylor KH, Wang X, Xu D, Ding HF, Munn DH, Caldwell C, Shi H. Pei L, et al. Among authors: shi h. Epigenetics. 2012 Jun 1;7(6):567-78. doi: 10.4161/epi.20237. Epub 2012 Jun 1. Epigenetics. 2012. PMID: 22534504 Free PMC article.

7

Aberrant epigenetic gene regulation in lymphoid malignancies.

Taylor KH, Briley A, Wang Z, Cheng J, Shi H, Caldwell CW. Taylor KH, et al. Among authors: shi h. Semin Hematol. 2013 Jan;50(1):38-47. doi: 10.1053/j.seminhematol.2013.01.003. Semin Hematol. 2013. PMID: 23507482 Review.

8

Roles of Distal and Genic Methylation in the Development of Prostate Tumorigenesis Revealed by Genome-wide DNA Methylation Analysis.

Wang Y, Jadhav RR, Liu J, Wilson D, Chen Y, Thompson IM, Troyer DA, Hernandez J, Shi H, Leach RJ, Huang TH, Jin VX. Wang Y, et al. Among authors: shi h. Sci Rep. 2016 Feb 29;6:22051. doi: 10.1038/srep22051. Sci Rep. 2016. PMID: 26924343 Free PMC article.

9

Hypomethylation coordinates antagonistically with hypermethylation in cancer development: a case study of leukemia.

Kushwaha G, Dozmorov M, Wren JD, Qiu J, Shi H, Xu D. Kushwaha G, et al. Among authors: shi h. Hum Genomics. 2016 Jul 25;10 Suppl 2(Suppl 2):18. doi: 10.1186/s40246-016-0071-5. Hum Genomics. 2016. PMID: 27461342 Free PMC article.

10

Methylation-specific oligonucleotide microarray: a new potential for high-throughput methylation analysis.

Gitan RS, Shi H, Chen CM, Yan PS, Huang TH. Gitan RS, et al. Among authors: shi h. Genome Res. 2002 Jan;12(1):158-64. doi: 10.1101/gr.202801. Genome Res. 2002. PMID: 11779841 Free PMC article.

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