Li J - Search Results

1

The long noncoding RNA MALAT1 promotes tumor-driven angiogenesis by up-regulating pro-angiogenic gene expression.

Tee AE, Liu B, Song R, Li J, Pasquier E, Cheung BB, Jiang C, Marshall GM, Haber M, Norris MD, Fletcher JI, Dinger ME, Liu T. Tee AE, et al. Among authors: li j. Oncotarget. 2016 Feb 23;7(8):8663-75. doi: 10.18632/oncotarget.6675. Oncotarget. 2016. PMID: 26848616 Free PMC article.

2

The long noncoding RNA lncNB1 promotes tumorigenesis by interacting with ribosomal protein RPL35.

Liu PY, Tee AE, Milazzo G, Hannan KM, Maag J, Mondal S, Atmadibrata B, Bartonicek N, Peng H, Ho N, Mayoh C, Ciaccio R, Sun Y, Henderson MJ, Gao J, Everaert C, Hulme AJ, Wong M, Lan Q, Cheung BB, Shi L, Wang JY, Simon T, Fischer M, Zhang XD, Marshall GM, Norris MD, Haber M, Vandesompele J, Li J, Mestdagh P, Hannan RD, Dinger ME, Perini G, Liu T. Liu PY, et al. Among authors: li j. Nat Commun. 2019 Nov 5;10(1):5026. doi: 10.1038/s41467-019-12971-3. Nat Commun. 2019. PMID: 31690716 Free PMC article.

3

Targeted Therapy of TERT-Rearranged Neuroblastoma with BET Bromodomain Inhibitor and Proteasome Inhibitor Combination Therapy.

Chen J, Nelson C, Wong M, Tee AE, Liu PY, La T, Fletcher JI, Kamili A, Mayoh C, Bartenhagen C, Trahair TN, Xu N, Jayatilleke N, Wong M, Peng H, Atmadibrata B, Cheung BB, Lan Q, Bryan TM, Mestdagh P, Vandesompele J, Combaret V, Boeva V, Wang JY, Janoueix-Lerosey I, Cowley MJ, MacKenzie KL, Dolnikov A, Li J, Polly P, Marshall GM, Reddel RR, Norris MD, Haber M, Fischer M, Zhang XD, Pickett HA, Liu T. Chen J, et al. Among authors: li j. Clin Cancer Res. 2021 Mar 1;27(5):1438-1451. doi: 10.1158/1078-0432.CCR-20-3044. Epub 2020 Dec 11. Clin Cancer Res. 2021. PMID: 33310889

4

Chromosome preference of disease genes and vectorization for the prediction of non-coding disease genes.

Peng H, Lan C, Liu Y, Liu T, Blumenstein M, Li J. Peng H, et al. Among authors: li j. Oncotarget. 2017 Aug 24;8(45):78901-78916. doi: 10.18632/oncotarget.20481. eCollection 2017 Oct 3. Oncotarget. 2017. PMID: 29108274 Free PMC article.

5

Delineation of the frequency and boundary of chromosomal copy number variations in paediatric neuroblastoma.

Ho N, Peng H, Mayoh C, Liu PY, Atmadibrata B, Marshall GM, Li J, Liu T. Ho N, et al. Among authors: li j. Cell Cycle. 2018;17(6):749-758. doi: 10.1080/15384101.2017.1421875. Cell Cycle. 2018. PMID: 29353549 Free PMC article.

6

Index suffix-prefix overlaps by (w, k)-minimizer to generate long contigs for reads compression.

Liu Y, Yu Z, Dinger ME, Li J. Liu Y, et al. Among authors: li j. Bioinformatics. 2019 Jun 1;35(12):2066-2074. doi: 10.1093/bioinformatics/bty936. Bioinformatics. 2019. PMID: 30407482

7

Identification of lung cancer miRNA-miRNA co-regulation networks through a progressive data refining approach.

Song R, Catchpoole DR, Kennedy PJ, Li J. Song R, et al. Among authors: li j. J Theor Biol. 2015 Sep 7;380:271-9. doi: 10.1016/j.jtbi.2015.05.025. Epub 2015 May 28. J Theor Biol. 2015. PMID: 26026830

8

Sequencing dropout-and-batch effect normalization for single-cell mRNA profiles: a survey and comparative analysis.

Lan T, Hutvagner G, Lan Q, Liu T, Li J. Lan T, et al. Among authors: li j. Brief Bioinform. 2021 Jul 20;22(4):bbaa248. doi: 10.1093/bib/bbaa248. Brief Bioinform. 2021. PMID: 33073843

9

Connecting rules from paired miRNA and mRNA expression data sets of HCV patients to detect both inverse and positive regulatory relationships.

Song R, Liu Q, Liu T, Li J. Song R, et al. Among authors: li j. BMC Genomics. 2015;16 Suppl 2(Suppl 2):S11. doi: 10.1186/1471-2164-16-S2-S11. Epub 2015 Jan 21. BMC Genomics. 2015. PMID: 25707620 Free PMC article.

10

Recognition of CRISPR/Cas9 off-target sites through ensemble learning of uneven mismatch distributions.

Peng H, Zheng Y, Zhao Z, Liu T, Li J. Peng H, et al. Among authors: li j. Bioinformatics. 2018 Sep 1;34(17):i757-i765. doi: 10.1093/bioinformatics/bty558. Bioinformatics. 2018. PMID: 30423065

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