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Inferring causal molecular networks: empirical assessment through a community-based effort.
Hill SM, Heiser LM, Cokelaer T, Unger M, Nesser NK, Carlin DE, Zhang Y, Sokolov A, Paull EO, Wong CK, Graim K, Bivol A, Wang H, Zhu F, Afsari B, Danilova LV, Favorov AV, Lee WS, Taylor D, Hu CW, Long BL, Noren DP, Bisberg AJ; HPN-DREAM Consortium; Mills GB, Gray JW, Kellen M, Norman T, Friend S, Qutub AA, Fertig EJ, Guan Y, Song M, Stuart JM, Spellman PT, Koeppl H, Stolovitzky G, Saez-Rodriguez J, Mukherjee S. Hill SM, et al. Among authors: taylor d. Nat Methods. 2016 Apr;13(4):310-8. doi: 10.1038/nmeth.3773. Epub 2016 Feb 22. Nat Methods. 2016. PMID: 26901648 Free PMC article.
Transient crosslinking kinetics optimize gene cluster interactions.
Walker B, Taylor D, Lawrimore J, Hult C, Adalsteinsson D, Bloom K, Forest MG. Walker B, et al. Among authors: taylor d. PLoS Comput Biol. 2019 Aug 21;15(8):e1007124. doi: 10.1371/journal.pcbi.1007124. eCollection 2019 Aug. PLoS Comput Biol. 2019. PMID: 31433796 Free PMC article.
EIGENVECTOR-BASED CENTRALITY MEASURES FOR TEMPORAL NETWORKS.
Taylor D, Myers SA, Clauset A, Porter MA, Mucha PJ. Taylor D, et al. Multiscale Model Simul. 2017;15(1):537-574. doi: 10.1137/16M1066142. Epub 2017 Mar 28. Multiscale Model Simul. 2017. PMID: 29046619 Free PMC article.
9,225 results