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An integrated transcriptomics-functional genomics approach reveals a small RNA that modulates Bacteroides thetaiotaomicron sensitivity to tetracyclines.
Ryan D, Bornet E, Prezza G, Alampalli SV, de Carvalho TF, Felchle H, Ebbecke T, Hayward R, Deutschbauer AM, Barquist L, Westermann AJ. Ryan D, et al. Among authors: barquist l. bioRxiv [Preprint]. 2023 Feb 16:2023.02.16.528795. doi: 10.1101/2023.02.16.528795. bioRxiv. 2023. Update in: Nat Microbiol. 2024 Apr;9(4):1130-1144. doi: 10.1038/s41564-024-01642-9 PMID: 36824877 Free PMC article. Updated. Preprint.
Systematic interrogation of CRISPR antimicrobials in Klebsiella pneumoniae reveals nuclease-, guide- and strain-dependent features influencing antimicrobial activity.
Vialetto E, Miele S, Goren MG, Yu J, Yu Y, Collias D, Beamud B, Osbelt L, Lourenço M, Strowig T, Brisse S, Barquist L, Qimron U, Bikard D, Beisel CL. Vialetto E, et al. Among authors: barquist l. Nucleic Acids Res. 2024 Jun 10;52(10):6079-6091. doi: 10.1093/nar/gkae281. Nucleic Acids Res. 2024. PMID: 38661215 Free PMC article.
DksA is a conserved master regulator of stress response in Acinetobacter baumannii.
Maharjan RP, Sullivan GJ, Adams FG, Shah BS, Hawkey J, Delgado N, Semenec L, Dinh H, Li L, Short FL, Parkhill J, Paulsen IT, Barquist L, Eijkelkamp BA, Cain AK. Maharjan RP, et al. Among authors: barquist l. Nucleic Acids Res. 2023 Jul 7;51(12):6101-6119. doi: 10.1093/nar/gkad341. Nucleic Acids Res. 2023. PMID: 37158230 Free PMC article.
Dual RNA-seq unveils noncoding RNA functions in host-pathogen interactions.
Westermann AJ, Förstner KU, Amman F, Barquist L, Chao Y, Schulte LN, Müller L, Reinhardt R, Stadler PF, Vogel J. Westermann AJ, et al. Among authors: barquist l. Nature. 2016 Jan 28;529(7587):496-501. doi: 10.1038/nature16547. Epub 2016 Jan 20. Nature. 2016. PMID: 26789254
85 results