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Visualization of LC-MS/MS proteomics data in MaxQuant.
Tyanova S, Temu T, Carlson A, Sinitcyn P, Mann M, Cox J. Tyanova S, et al. Among authors: sinitcyn p. Proteomics. 2015 Apr;15(8):1453-6. doi: 10.1002/pmic.201400449. Epub 2015 Mar 5. Proteomics. 2015. PMID: 25644178 Free PMC article.
MaxQuant goes Linux.
Sinitcyn P, Tiwary S, Rudolph J, Gutenbrunner P, Wichmann C, Yılmaz Ş, Hamzeiy H, Salinas F, Cox J. Sinitcyn P, et al. Nat Methods. 2018 Jun;15(6):401. doi: 10.1038/s41592-018-0018-y. Nat Methods. 2018. PMID: 29855570 No abstract available.
MaxDIA enables library-based and library-free data-independent acquisition proteomics.
Sinitcyn P, Hamzeiy H, Salinas Soto F, Itzhak D, McCarthy F, Wichmann C, Steger M, Ohmayer U, Distler U, Kaspar-Schoenefeld S, Prianichnikov N, Yılmaz Ş, Rudolph JD, Tenzer S, Perez-Riverol Y, Nagaraj N, Humphrey SJ, Cox J. Sinitcyn P, et al. Nat Biotechnol. 2021 Dec;39(12):1563-1573. doi: 10.1038/s41587-021-00968-7. Epub 2021 Jul 8. Nat Biotechnol. 2021. PMID: 34239088 Free PMC article.
Direct identification of clinically relevant neoepitopes presented on native human melanoma tissue by mass spectrometry.
Bassani-Sternberg M, Bräunlein E, Klar R, Engleitner T, Sinitcyn P, Audehm S, Straub M, Weber J, Slotta-Huspenina J, Specht K, Martignoni ME, Werner A, Hein R, H Busch D, Peschel C, Rad R, Cox J, Mann M, Krackhardt AM. Bassani-Sternberg M, et al. Among authors: sinitcyn p. Nat Commun. 2016 Nov 21;7:13404. doi: 10.1038/ncomms13404. Nat Commun. 2016. PMID: 27869121 Free PMC article.
The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins.
Shurtleff MJ, Itzhak DN, Hussmann JA, Schirle Oakdale NT, Costa EA, Jonikas M, Weibezahn J, Popova KD, Jan CH, Sinitcyn P, Vembar SS, Hernandez H, Cox J, Burlingame AL, Brodsky JL, Frost A, Borner GH, Weissman JS. Shurtleff MJ, et al. Among authors: sinitcyn p. Elife. 2018 May 29;7:e37018. doi: 10.7554/eLife.37018. Elife. 2018. PMID: 29809151 Free PMC article.
Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer.
Lancaster NM, Sinitcyn P, Forny P, Peters-Clarke TM, Fecher C, Smith AJ, Shishkova E, Arrey TN, Pashkova A, Robinson ML, Arp N, Fan J, Hansen J, Galmozzi A, Serrano LR, Rojas J, Gasch AP, Westphall MS, Stewart H, Hock C, Damoc E, Pagliarini DJ, Zabrouskov V, Coon JJ. Lancaster NM, et al. Among authors: sinitcyn p. Nat Commun. 2024 Aug 15;15(1):7016. doi: 10.1038/s41467-024-51274-0. Nat Commun. 2024. PMID: 39147754 Free PMC article.
17 results