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Page 1
Early myeloid lineage choice is not initiated by random PU.1 to GATA1 protein ratios.
Hoppe PS, Schwarzfischer M, Loeffler D, Kokkaliaris KD, Hilsenbeck O, Moritz N, Endele M, Filipczyk A, Gambardella A, Ahmed N, Etzrodt M, Coutu DL, Rieger MA, Marr C, Strasser MK, Schauberger B, Burtscher I, Ermakova O, Bürger A, Lickert H, Nerlov C, Theis FJ, Schroeder T. Hoppe PS, et al. Among authors: kokkaliaris kd. Nature. 2016 Jul 14;535(7611):299-302. doi: 10.1038/nature18320. Nature. 2016. PMID: 27411635
Network plasticity of pluripotency transcription factors in embryonic stem cells.
Filipczyk A, Marr C, Hastreiter S, Feigelman J, Schwarzfischer M, Hoppe PS, Loeffler D, Kokkaliaris KD, Endele M, Schauberger B, Hilsenbeck O, Skylaki S, Hasenauer J, Anastassiadis K, Theis FJ, Schroeder T. Filipczyk A, et al. Among authors: kokkaliaris kd. Nat Cell Biol. 2015 Oct;17(10):1235-46. doi: 10.1038/ncb3237. Epub 2015 Sep 21. Nat Cell Biol. 2015. PMID: 26389663
Multicolor quantitative confocal imaging cytometry.
Coutu DL, Kokkaliaris KD, Kunz L, Schroeder T. Coutu DL, et al. Among authors: kokkaliaris kd. Nat Methods. 2018 Jan;15(1):39-46. doi: 10.1038/nmeth.4503. Epub 2017 Nov 13. Nat Methods. 2018. PMID: 29320487
CSF-1-induced Src signaling can instruct monocytic lineage choice.
Endele M, Loeffler D, Kokkaliaris KD, Hilsenbeck O, Skylaki S, Hoppe PS, Schambach A, Stanley ER, Schroeder T. Endele M, et al. Among authors: kokkaliaris kd. Blood. 2017 Mar 23;129(12):1691-1701. doi: 10.1182/blood-2016-05-714329. Epub 2017 Feb 3. Blood. 2017. PMID: 28159742 Free PMC article.
Prospective identification of hematopoietic lineage choice by deep learning.
Buggenthin F, Buettner F, Hoppe PS, Endele M, Kroiss M, Strasser M, Schwarzfischer M, Loeffler D, Kokkaliaris KD, Hilsenbeck O, Schroeder T, Theis FJ, Marr C. Buggenthin F, et al. Among authors: kokkaliaris kd. Nat Methods. 2017 Apr;14(4):403-406. doi: 10.1038/nmeth.4182. Epub 2017 Feb 20. Nat Methods. 2017. PMID: 28218899 Free PMC article.
Inflammatory signals directly instruct PU.1 in HSCs via TNF.
Etzrodt M, Ahmed N, Hoppe PS, Loeffler D, Skylaki S, Hilsenbeck O, Kokkaliaris KD, Kaltenbach HM, Stelling J, Nerlov C, Schroeder T. Etzrodt M, et al. Among authors: kokkaliaris kd. Blood. 2019 Feb 21;133(8):816-819. doi: 10.1182/blood-2018-02-832998. Epub 2018 Oct 9. Blood. 2019. PMID: 30301719 Free article.
Asymmetric lysosome inheritance predicts activation of haematopoietic stem cells.
Loeffler D, Wehling A, Schneiter F, Zhang Y, Müller-Bötticher N, Hoppe PS, Hilsenbeck O, Kokkaliaris KD, Endele M, Schroeder T. Loeffler D, et al. Among authors: kokkaliaris kd. Nature. 2019 Sep;573(7774):426-429. doi: 10.1038/s41586-019-1531-6. Epub 2019 Sep 4. Nature. 2019. PMID: 31485073
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