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Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination.
Budroni S, Siena E, Dunning Hotopp JC, Seib KL, Serruto D, Nofroni C, Comanducci M, Riley DR, Daugherty SC, Angiuoli SV, Covacci A, Pizza M, Rappuoli R, Moxon ER, Tettelin H, Medini D. Budroni S, et al. Among authors: riley dr. Proc Natl Acad Sci U S A. 2011 Mar 15;108(11):4494-9. doi: 10.1073/pnas.1019751108. Epub 2011 Feb 28. Proc Natl Acad Sci U S A. 2011. PMID: 21368196 Free PMC article.
Ten years of pan-genome analyses.
Vernikos G, Medini D, Riley DR, Tettelin H. Vernikos G, et al. Among authors: riley dr. Curr Opin Microbiol. 2015 Feb;23:148-54. doi: 10.1016/j.mib.2014.11.016. Epub 2014 Dec 5. Curr Opin Microbiol. 2015. PMID: 25483351 Review.
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species.
Donati C, Hiller NL, Tettelin H, Muzzi A, Croucher NJ, Angiuoli SV, Oggioni M, Dunning Hotopp JC, Hu FZ, Riley DR, Covacci A, Mitchell TJ, Bentley SD, Kilian M, Ehrlich GD, Rappuoli R, Moxon ER, Masignani V. Donati C, et al. Among authors: riley dr. Genome Biol. 2010;11(10):R107. doi: 10.1186/gb-2010-11-10-r107. Epub 2010 Oct 29. Genome Biol. 2010. PMID: 21034474 Free PMC article.
Comparative genomics: the bacterial pan-genome.
Tettelin H, Riley D, Cattuto C, Medini D. Tettelin H, et al. Among authors: riley d. Curr Opin Microbiol. 2008 Oct;11(5):472-7. doi: 10.1016/j.mib.2008.09.006. Curr Opin Microbiol. 2008. PMID: 19086349 Review.
Comparative genomics of the genus Bifidobacterium.
Bottacini F, Medini D, Pavesi A, Turroni F, Foroni E, Riley D, Giubellini V, Tettelin H, van Sinderen D, Ventura M. Bottacini F, et al. Among authors: riley d. Microbiology (Reading). 2010 Nov;156(Pt 11):3243-3254. doi: 10.1099/mic.0.039545-0. Epub 2010 Jul 15. Microbiology (Reading). 2010. PMID: 20634238 Free article.
Phenotypic, genomic, and transcriptional characterization of Streptococcus pneumoniae interacting with human pharyngeal cells.
Kimaro Mlacha SZ, Romero-Steiner S, Hotopp JC, Kumar N, Ishmael N, Riley DR, Farooq U, Creasy TH, Tallon LJ, Liu X, Goldsmith CS, Sampson J, Carlone GM, Hollingshead SK, Scott JA, Tettelin H. Kimaro Mlacha SZ, et al. BMC Genomics. 2013 Jun 9;14:383. doi: 10.1186/1471-2164-14-383. BMC Genomics. 2013. PMID: 23758733 Free PMC article.
1,247 results