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BioC: a minimalist approach to interoperability for biomedical text processing.
Comeau DC, Islamaj Doğan R, Ciccarese P, Cohen KB, Krallinger M, Leitner F, Lu Z, Peng Y, Rinaldi F, Torii M, Valencia A, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ. Comeau DC, et al. Among authors: islamaj dogan r. Database (Oxford). 2013 Sep 18;2013:bat064. doi: 10.1093/database/bat064. Print 2013. Database (Oxford). 2013. PMID: 24048470 Free PMC article.
BioC implementations in Go, Perl, Python and Ruby.
Liu W, Islamaj Doğan R, Kwon D, Marques H, Rinaldi F, Wilbur WJ, Comeau DC. Liu W, et al. Among authors: islamaj dogan r. Database (Oxford). 2014 Jun 23;2014:bau059. doi: 10.1093/database/bau059. Print 2014. Database (Oxford). 2014. PMID: 24961236 Free PMC article.
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Kim S, Islamaj Doğan R, Chatr-Aryamontri A, Chang CS, Oughtred R, Rust J, Batista-Navarro R, Carter J, Ananiadou S, Matos S, Santos A, Campos D, Oliveira JL, Singh O, Jonnagaddala J, Dai HJ, Su EC, Chang YC, Su YC, Chu CH, Chen CC, Hsu WL, Peng Y, Arighi C, Wu CH, Vijay-Shanker K, Aydın F, Hüsünbeyi ZM, Özgür A, Shin SY, Kwon D, Dolinski K, Tyers M, Wilbur WJ, Comeau DC. Kim S, et al. Among authors: islamaj dogan r. Database (Oxford). 2016 Sep 1;2016:baw121. doi: 10.1093/database/baw121. Print 2016. Database (Oxford). 2016. PMID: 27589962 Free PMC article.
Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Islamaj Dogan R, Kim S, Chatr-Aryamontri A, Wei CH, Comeau DC, Antunes R, Matos S, Chen Q, Elangovan A, Panyam NC, Verspoor K, Liu H, Wang Y, Liu Z, Altinel B, Hüsünbeyi ZM, Özgür A, Fergadis A, Wang CK, Dai HJ, Tran T, Kavuluru R, Luo L, Steppi A, Zhang J, Qu J, Lu Z. Islamaj Dogan R, et al. Database (Oxford). 2019 Jan 1;2019:bay147. doi: 10.1093/database/bay147. Database (Oxford). 2019. PMID: 30689846 Free PMC article.
Author Name Disambiguation for PubMed.
Liu W, Islamaj Doğan R, Kim S, Comeau DC, Kim W, Yeganova L, Lu Z, Wilbur WJ. Liu W, et al. Among authors: islamaj dogan r. J Assoc Inf Sci Technol. 2014 Apr;65(4):765-781. doi: 10.1002/asi.23063. Epub 2013 Nov 21. J Assoc Inf Sci Technol. 2014. PMID: 28758138 Free PMC article.
18 results